KEGG   Phaeodactylum tricornutum: PHATRDRAFT_45914
Entry
PHATRDRAFT_45914  CDS       T01075                                 
Name
(RefSeq) hypothetical protein
  KO
K10884  ATP-dependent DNA helicase 2 subunit 1
Organism
pti  Phaeodactylum tricornutum
Pathway
pti03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:pti00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    PHATRDRAFT_45914
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pti03041]
    PHATRDRAFT_45914
   03400 DNA repair and recombination proteins [BR:pti03400]
    PHATRDRAFT_45914
Spliceosome [BR:pti03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    PHATRDRAFT_45914
DNA repair and recombination proteins [BR:pti03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA-PK complex
     PHATRDRAFT_45914
SSDB
Motif
Pfam: Ku SAP Ku_C
Other DBs
NCBI-GeneID: 7201003
NCBI-ProteinID: XP_002180288
JGI: 45914
UniProt: B7FZ51
Position
8:complement(653812..656384)
AA seq 746 aa
MDNDSDDDNLWGDEPDWFGDNDDDKNSNKQHGEASTVLPDVPVAQHLLILLDCGPDMLRA
SLPDPEFPDDLIAPLDVVLHACEALVRAQVRASVFAATGQRDALGLYCYNTRPRLPVPTT
TATTKTTTTSFPREDYNDDEEEHEDDNDDDYDRFVHGPLPSTAHEIVPLAPPGKAAVQTL
QAVQDHPVRGRRIDLPQLYGHRHVTSPTTTPTTPTTTAPHPLQTALFHALQVFGRAKCVR
KTTPTRPADWQHVWIFTNNAHPVSSDGDDPDGCSQRQLLQTALHDAAEAGIDVTVWPLPN
GPDQDNVDSSVYEQLEMDVAPSTAWTLLVDILPETHRQWKQARRAVGVPLLLPDWKERPP
NDPNIQLNLYRLVQESRPPKQYHVHQETGRALEKLTQTVTVRGSELLEQSWGTGHAKNSW
GGGADRIQTYVEFGGEKIPMSYADRDAIRRSCNANPDFASLILLGFHDDQSIPLAHTMER
SYFCVPDEESVEGSTAAFAHLHASMLRKKVVAVGELLTKVTAAARLVALVPLPEERVDSH
FDDELPEILRPAGMLVVSLPFEDEVRELDDDEATNVWEATGTDVASPDLVKAATKLIQRQ
IIDSIRIGENFENAALLKMWNYIEHVALEEPMPEQPASETILDKDLVLERARHEIDVFLA
NLPDDSIVEKMPRKRKVEPDDSRLDWFTIWSRDQYFECTNSDLKKKLRSCGEKVSGKKQD
LIDRLVPILENEFGKRVIKSEPLLTE
NT seq 2241 nt   +upstreamnt  +downstreamnt
atggacaacgattccgatgatgacaatctctggggagacgagcccgactggttcggagac
aacgacgacgacaagaacagcaataagcaacacggtgaggcgtcgacggtcctccccgac
gtgcccgtcgcacagcatttgctgattttactcgattgcggtcccgatatgctgcgggct
tcgcttccggatcccgaatttcccgacgaccttatcgctcccttggatgtcgtcctgcac
gcctgtgaggcgctcgtaagggcccaagtccgcgccagcgtctttgccgcaaccggacaa
cgtgatgcgctcgggctttactgctacaatacccgcccccgattacccgttccaacaaca
acagcaacaacaaaaacaacaacaacatcgtttcctagagaagattacaatgatgatgag
gaggagcacgaggacgacaatgatgacgactacgatcgcttcgtccacggaccgttgcct
agtacagcacacgaaatagttcccctcgcaccaccggggaaagccgccgtacaaacctta
caagccgtccaggatcatcccgtgcgcggccgtcgaattgaccttccccagttgtacggt
caccggcacgtcacatccccgaccaccactcccactacgccaacaacgacggcaccccat
ccgctccaaacagccctgtttcacgcactccaagtctttggtcgcgccaagtgcgtccgc
aaaactactcccacccgaccagccgattggcaacatgtatggatctttaccaacaacgcc
catcccgtgtcgagtgacggtgacgatcccgatggctgttcccagcgacaactcctacag
accgccctgcacgacgccgccgaagccgggatagacgttacagtctggccccttccaaac
ggacccgatcaagacaacgtggactcgtccgtctacgaacaattggaaatggacgtggcc
ccgtctaccgcgtggacgttgctggttgacatcctaccggaaacacaccgtcagtggaaa
caagcgcgacgggcggtcggagtcccactcttgctgccggactggaaggaacgtccaccc
aacgacccgaacatacaactcaatctgtatcgactcgtgcaggaatcgcgaccacccaag
caataccacgtacaccaagaaaccggacgcgctctggaaaaactaacgcaaaccgttacg
gtgcgtgggagcgaattgttggaacaaagctggggcaccggtcacgcaaaaaactcttgg
ggcggcggcgccgaccgcatacagacctacgtcgagtttggtggcgaaaagatacccatg
agttacgccgaccgggacgcgattcggcgatcctgcaacgccaatccagactttgcgtcc
ctcatcctcctggggtttcacgacgaccagtccattccgctggcgcacaccatggaacgt
tcgtacttttgtgtccccgacgaggagagcgttgaagggagtaccgccgcttttgcacac
cttcacgcgagcatgttgcggaaaaaggtggtggccgtgggagaactcttgaccaaggta
acagcagctgcacgactagtagccttggttccgttgcccgaggaaagggttgacagccac
ttcgatgatgaattaccagaaattctccgacccgctggaatgctggtcgtgagtttgccc
ttcgaggacgaagtccgggaactggacgatgacgaggcgaccaatgtgtgggaggcaaca
gggaccgatgtggcttctcccgacctggttaaggccgccaccaaactgatccaacgacaa
atcattgatagtattcggataggggagaacttcgaaaacgcggctctgctcaaaatgtgg
aactacattgagcatgttgctttggaagagcccatgccggaacaaccggcatcggagact
attctcgataaggatctggtcctagaacgggcacgacacgaaattgacgtatttttggcg
aacttgcccgatgatagtatagtcgaaaagatgccaaggaaacgcaaggttgaacccgac
gattcgcggctggactggtttactatttggagccgagatcaatacttcgaatgtacgaac
agcgacttaaaaaagaaactgagatcttgcggggagaaggtttccggtaagaaacaggac
ctgatcgaccgtttagtccctattttagaaaacgagtttggaaagagggtgatcaagtct
gaaccattgcttaccgaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (41)   
   KEGG ORTHOLOGY (1)   
   RefGene (36)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (52)   

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