KEGG   Phaeodactylum tricornutum: PHATRDRAFT_51026Help
Entry
PHATRDRAFT_51026  CDS       T01075                                 

Definition
(RefSeq) histone deacetylase 1 isoform
  KO
K06067  
histone deacetylase 1/2 [EC:3.5.1.98]
Organism
pti  Phaeodactylum tricornutum
Brite
Enzymes [BR:pti01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     PHATRDRAFT_51026
Chromosome [BR:pti03036]
 Eukaryotic Type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     PHATRDRAFT_51026
   HDAC complexes
    Sin3A-HDAC complex
     PHATRDRAFT_51026
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    PHATRDRAFT_51026
  Chromatin remodeling factors
   NuRD complex
    PHATRDRAFT_51026
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
12
AA seq 426 aa AA seqDB search
MGDSRRVSYFYDAEIGNYHYGQGHPMKPHRVRMTHNLVVNYGLYRKMEVFRPRLVSPTAM
TRFHSDDYINFLRVITPDNMQDYIRPLQRFNVGEDCPVFDGLFEFCQLYTSGSIGGAARL
NENRVDIVINWAGGLHHAKKAEASGFCYVNDCVLAILELLKKHERVLYIDIDIHHGDGVE
EAFYSTNRVMTVSFHKFGEYFPGTGDVLDVGYAQGKNYAINFPLNDGMDDDSYESIFRPV
IGKIMEVFAPGAVVLQCGADSLSGDRLGCFNLSAQGHANCVEFVRSFNIPMLVLGGGGYT
LRNVPRCWTYETSVLTGEKVSDELPFNDYFEYFGPDYRLHLPVSNMENLNSRAYLDKTKN
QLLDILSQVEPVPSVQIQTGQIDSQTNPRSMAMEVDDEPPAEESNPDARVTREDTGRKEH
ASELAA
NT seq 1281 nt NT seq  +upstreamnt  +downstreamnt
atgggggactctaggcgtgtatcgtacttttacgatgccgagatcggaaactaccattac
ggccaaggccatccgatgaagcctcatcgcgtgcgcatgacgcacaatctcgtcgtcaac
tacggcctctaccgcaagatggaggtctttcgtcctcgtcttgtttcgcccaccgccatg
acgcgttttcacagcgacgactacatcaacttcctccgagtcattacccccgacaatatg
caggattacattcgtcccctccagcgcttcaacgtgggagaagactgcccggtcttcgac
ggtttgttcgagttttgtcagctctacacatccggatcgattggcggcgccgctcggctt
aacgaaaatcgcgtcgatattgttatcaactgggctggcggtctgcatcacgctaaaaag
gccgaagcctccggattctgttacgtcaatgactgtgtcttggccattctcgagcttctc
aagaaacacgaacgagttctatatatcgacattgatattcatcacggagatggagtcgaa
gaagccttttactcgaccaaccgcgtcatgacggtcagttttcacaagtttggcgagtac
tttccaggaaccggggacgtcctcgatgtgggctacgcccagggcaagaactacgccatt
aacttcccgctcaacgacggtatggatgacgattcgtacgaatccatctttcgtccagtg
attggcaagatcatggaagtattcgcaccgggcgctgttgtcttgcaatgcggcgccgat
tcgttatcgggcgatcgtctcggctgctttaatctttcggcacagggccacgctaactgt
gttgagtttgtccgctccttcaatattccaatgctggtgctaggaggcggtggttatacg
ctacgcaatgtaccgcgctgctggacgtacgaaacgtcagtccttacgggagaaaaagtt
tcggacgaattaccctttaacgattatttcgagtactttggaccggattatcggctccat
ttgcccgtctcgaacatggaaaatcttaactcgcgagcctatttggataaaaccaagaat
cagcttttggatatactgagtcaagttgagcccgtgcccagcgtacaaatccaaaccgga
cagatagattcacagaccaaccctcgctctatggcgatggaagtggacgacgagcctcca
gcggaggaatcaaatccggatgcgcgcgtaacgagggaagacactgggcgaaaggaacac
gcgtccgagctggcggcgtaa

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