KEGG   Phaeodactylum tricornutum: PHATRDRAFT_54066
Entry
PHATRDRAFT_54066  CDS       T01075                                 
Symbol
SybE
Name
(RefSeq) hypothetical protein
  KO
K08517  vesicle transport protein SEC22
Organism
pti  Phaeodactylum tricornutum
Pathway
pti04130  SNARE interactions in vesicular transport
pti04145  Phagosome
Brite
KEGG Orthology (KO) [BR:pti00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    PHATRDRAFT_54066 (SybE)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    PHATRDRAFT_54066 (SybE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pti04131]
    PHATRDRAFT_54066 (SybE)
Membrane trafficking [BR:pti04131]
 SNARE
  VAMP, Ykt6, Sec22 (R)
   Sec22
    PHATRDRAFT_54066 (SybE)
SSDB
Motif
Pfam: Longin Synaptobrevin Shisa
Other DBs
NCBI-GeneID: 7196974
NCBI-ProteinID: XP_002177527
JGI: 54066
UniProt: B7FR63
Position
1:complement(2477625..2478614)
AA seq 227 aa
MPPILTQVARSSDALPLIATSTPTHNLSVSQKQQQDAKQLMRSMTAGNPNKMSIQSERMV
FYYMQRDNLCFLTLTEDSYPKRLAFLYLEEVADAVLQELVREFGTDWRANVDQAARPFQF
IHYDPIIQRKQREFRDQRDVKNKSKLQEDLGEIQSIMKKNIDEILNRGEKLDNVSNISNE
LRSKSKDFKWGTKKLTWQARMQQYGPMVVGASIICIVLYVKIFHIGF
NT seq 684 nt   +upstreamnt  +downstreamnt
atgcctccaattttgactcaagtggcacggagctccgatgcgttgccgttgatagcgaca
tcaaccccaacgcacaacctctctgtctcacaaaagcagcaacaagatgcaaagcagctt
atgcgcagtatgacagctgggaacccgaataagatgagtattcagtctgaacggatggtc
ttttactacatgcaacgcgataatctatgttttttaaccttgacggaagatagttatccc
aaaagactggcatttctttatttggaagaagtagccgacgctgtactgcaagagctcgtc
cgagagtttggtaccgattggcgggcaaatgttgaccaggcggcgcgtccatttcagttt
attcattatgatcccataattcaacgaaaacagcgagagtttcgtgaccaacgggatgta
aagaacaaatccaaattgcaggaagacttgggcgagatccagtccataatgaaaaagaac
attgacgaaattctgaatcggggtgagaagcttgataacgtctcaaatatatccaacgag
ttgcgcagcaaatcaaaagacttcaagtggggtactaagaaactcacctggcaagcacgg
atgcaacagtacggtcccatggtagtcggtgcttctatcatttgcattgtgctttacgtc
aagatctttcacattggtttctga

DBGET integrated database retrieval system