KEGG   Paramecium tetraurelia: GSPATT00007233001
Entry
GSPATT00007233001 CDS       T01055                                 
Name
(RefSeq) hypothetical protein
  KO
K03257  translation initiation factor 4A
Organism
ptm  Paramecium tetraurelia
Brite
KEGG Orthology (KO) [BR:ptm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptm03019]
    GSPATT00007233001
   03012 Translation factors [BR:ptm03012]
    GSPATT00007233001
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ptm04147]
    GSPATT00007233001
Messenger RNA biogenesis [BR:ptm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     GSPATT00007233001
   mRNA cycle factors
    Stress granule specific factors
     GSPATT00007233001
Translation factors [BR:ptm03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    GSPATT00007233001
Exosome [BR:ptm04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   GSPATT00007233001
  Exosomal proteins of bladder cancer cells
   GSPATT00007233001
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Helicase_C_2 AAA_19 AAA_30 HEM4 AAA_22 P-loop_SecA
Other DBs
NCBI-GeneID: 5022203
NCBI-ProteinID: XP_001436418
Genoscope: GSPATT00007233001
UniProt: A0CE04
Position
undetermined
AA seq 395 aa
MDQATQDIQENWNEQVETFEELTLSKDLLRGIFSYGFERPSAIQQKAIKPIILGKDVLAQ
AQSGTGKTGTFTIGALQRIDPNQRKTQVIILAPVRELAKQIYDVVKGIGQYLNIEAFCCI
GGTSTQETREKCKQGVHIIIATPGRLIDMMKNKYLDATFMRLLVVDEADQMLDQGFSDNF
AEILKMVPGDIQIALFSATFPQEIIELSKQFLREGTAKILVKKEQLTLEGIRQFYIAIQQ
EDQKFRVLVELYKNLTVSQSILFCNSKKTVDDLHDKLTAEGFTVSKIHSQMEQKEREQVM
QEFKKGAARILVSTDLMGRGIDVQQLSLVINYEFPRLKEQYIHRVGRAGRYGRKGVAINM
VAQQEANLLLEVEKYYNTKIDEMPKDLAEVEKELS
NT seq 1188 nt   +upstreamnt  +downstreamnt
atggatcaagctacttaagatatacaagaaaattggaatgagcaagtcgaaacattcgaa
gaattaacattaagcaaagatttattgagaggcatcttctcttacggtttcgaaagaccc
tcagccatctaataaaaggccattaaaccaatcatccttggtaaagacgtattggcacaa
gcataatcaggaactggaaagacaggtacattcacaattggtgctttacaaagaattgac
ccaaattagagaaagacccaagtcatcattttggcaccagtcagagaattggcaaagcaa
atttatgatgttgtcaaaggaattggataatatttaaatattgaagccttttgttgcatt
ggaggaacctcaacacaagaaacaagagagaaatgcaaataaggtgtgcacatcatcatt
gccactccaggaagattgattgacatgatgaaaaacaaatatttggatgccacattcatg
agattattagttgttgatgaagctgattagatgttggatcaaggattcagtgataatttc
gctgaaatccttaaaatggtaccaggagatatctaaattgcattgtttagtgcaacattc
ccataagaaattattgaattgagtaaataattcttaagagaaggaacagcaaagatttta
gtcaagaaagaataattgaccttggaaggtattagatagttctacattgccatttaataa
gaagaccaaaagttcagagttttggttgaattatacaagaatcttacagtttcataatca
atcttattttgcaattccaaaaagactgtcgatgatctccatgataaattgacagcagaa
ggatttacagtcagtaaaatccacagtcaaatggaataaaaggaaagagaataagttatg
taagaattcaaaaagggagctgcaagaatcctagtatctacagatcttatgggaagaggt
attgatgttcaataattatctttggttatcaattatgaattcccaagactcaaggaataa
tatattcacagagttggaagagctggtagatatggtagaaagggagttgccatcaatatg
gttgcttaacaagaagctaatctcttattagaagttgaaaagtattacaacactaaaatt
gatgaaatgcccaaggatttggctgaagtagaaaaggaattaagttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (33)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   GENOSCOPE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (50)   

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