KEGG   Paramecium tetraurelia: GSPATT00024002001
Entry
GSPATT00024002001 CDS       T01055                                 
Name
(RefSeq) hypothetical protein
  KO
K12606  CCR4-NOT transcription complex subunit 9
Organism
ptm  Paramecium tetraurelia
Pathway
ptm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ptm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GSPATT00024002001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptm03019]
    GSPATT00024002001
Messenger RNA biogenesis [BR:ptm03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     GSPATT00024002001
SSDB
Motif
Pfam: Rcd1 Roquin_1_2-like_ROQ IFN-gamma
Other DBs
NCBI-GeneID: 5044456
NCBI-ProteinID: XP_001458671
Genoscope: GSPATT00024002001
UniProt: A0E7K7
Position
undetermined
AA seq 345 aa
MSNQYVIVPQNYRSDSMVSISPADKRYFEQAQAKQKSPPQQMMFGGYSPSPSLQKSLSTQ
LSEQSIDDFSRMQKDSDTELVVQYILQLRDADKREQALSELSKKRESFPHLAPLLWHSVG
TIAIFLQEIAVVYQHLQPAQLTQAQSSRICSVLGLLQCLALHVQTRSCFLRAHIPLFLYP
FLNTSNKSKAFENLRVTSLGVIGALVKGDDPEAINFLMQTEIIPLCLRIMKKGQELSRTV
ATFIVQKILLDDNGLNYICQTPERFFAVSQVLQTMIDDLHQSQKDDQRLLRHIIRCYLRL
SENQKAGEVLKKYLPQVLKDPTQSFIKDEVVKKWHNNLLQNLSIK
NT seq 1038 nt   +upstreamnt  +downstreamnt
atgtccaatcaatatgttatcgtgccttaaaattatcgaagtgacagtatggtaagcata
tcacctgctgacaaacgatattttgaacaggctcaggccaagtaaaaatcgcctcctcaa
caaatgatgttcggagggtactcgccatcacctagtcttcaaaaaagtttaagcactcaa
ttatcagaacaaagcattgatgattttagtaggatgtaaaaagattcagatactgagtta
gttgtgcaatatatactttaattgagagacgcagataaaagagaataagcattatcagag
ttgtccaaaaaaagagaaagctttcctcatttagcacctctcttatggcattctgttggt
accatagctatatttctataagaaattgcagttgtatatcagcatttacaaccagcctag
cttacacaggcttaatcttctagaatctgcagtgttttgggattgctacaatgtcttgct
ctacatgtgtaaacaagatcttgcttcttaagagctcatattccattatttctatatcca
tttctaaacactagtaacaagagcaaagcgttcgaaaacctaagagtcacaagtttgggt
gtaataggtgctttggtgaagggagatgatccagaggcgattaattttttaatgcagact
gaaatcattccactttgtttgagaatcatgaaaaaaggacaagaactctccagaacagtt
gctacatttatagtctagaagatccttctcgatgacaatggtctcaattatatctgttag
actcctgaaagattctttgcagtcagctaagtcttacaaaccatgattgatgatttacat
caatcctaaaaagatgactaaagattattgagacacataattagatgttatttgagatta
tctgaaaaccagaaagctggggaggtccttaaaaaatatttgccacaagtattaaaagac
ccaactcaatcttttattaaagatgaagtggtaaaaaagtggcataataatttgcttcaa
aatctttcgatcaaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (37)   
   KEGG ORTHOLOGY (1)   
   RefGene (32)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   GENOSCOPE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (47)   

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