KEGG T01055: GSPATT00025612001

Paramecium tetraurelia: GSPATT00025612001

Entry

GSPATT00025612001 CDS T01055

Definition

hypothetical protein

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

ptm Paramecium tetraurelia

Pathway

ptm03410	Base excision repair
ptm03420	Nucleotide excision repair
ptm03430	Mismatch repair
ptm03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:ptm03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:ptm03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:ptm03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:ptm03450]

SSDB

Motif

Pfam:

DNA_ligase_OB_2 DNA_ligase_A_M WGR FHIPEP

Other DBs

NCBI-GI:

NCBI-GeneID:

Genoscope:

UniProt:

Position

undetermined

AA seq 399 aa
MKKYLQCDSKFWSITIEENDETKLFIRYGNLCDYEELNVKKVEKQFPSKEECQKYCEEAS
KTKEDKGYQEVVPGQQIQQQIQKNDSPIQNRPVQTKQQQKQSNAIKRTGSLKPDTIAAIT
DDALNGRQQAIKGPAVDLGKGTIPLGKVMLAQTWNEEIDPKGYYLSEKLDGMRMIWTGSK
MYSRNGNPIQFPDFFVQGWPKSYLDGELWLERDQFSKLVSITKRQVPVEDDWRKVKYMVF
DAPGLKLPFKDRYLRFKQACEQANQYIVYVPHIVCKGYDHLIDELEAVQDLEGEGLMLRD
PDSTYEQRRSDKLLKVKTFMDDEATVLAHEEGTGRCQGMLGSLKVKNTSGIVFNIGSGLT
DDIRQKPPKIGSRITYKYYGVSKNNVPRFPIYLRERPKE

NT seq 1200 nt +upstreamnt +downstreamnt
atgaaaaagtatttataatgtgatagtaaattttggtcaataacaatcgaagaaaacgat
gaaacaaagttattcatcagatatggcaatttgtgtgattatgaagagttgaatgtaaaa
aaagtggagaagtaattcccatcaaaagaagaatgttagaaatattgtgaagaagcatcc
aagacaaaagaagataagggatattaagaagtggtgccaggccaataaatctaataataa
atacaaaaaaatgattcacccatttaaaatcgtcctgtataaactaagtagcaataaaaa
caaagcaatgctattaaaagaactggatcattaaagccagatactatagcagcaattact
gatgacgctttgaatggaaggtaataagcaatcaaaggtccagctgttgatttgggaaaa
ggtacaattccattggggaaagtgatgttagcataaacatggaatgaagaaattgatcca
aagggatattatttaagtgagaaattggatggcatgagaatgatttggactggttcgaaa
atgtattcaagaaatggcaatcccattcaatttcctgacttttttgtataaggatggccc
aaatcttatttggatggagaattgtggttagagagggatcaattttcaaaattggtttct
attaccaaaagataagttccagtggaagatgattggagaaaggtgaaatacatggttttt
gatgctcctggattaaaactacctttcaaagatagatatttgagatttaagtaggcatgt
gaataagcaaattaatacatagtttatgtacctcatatagtttgcaaagggtatgatcat
ctgatagatgaactagaagctgtataggatttggaaggagaagggttgatgttaagagat
ccagacagcacttatgaatagagaagatcagacaaattgttgaaggtgaaaacatttatg
gatgatgaggctactgtattggctcatgaagaaggaacagggagatgttaaggaatgctt
gggtctctgaaggttaaaaatacaagtggaatagtgttcaatattggatcaggtctgact
gatgatatcagataaaaaccaccgaagattggttccaggatcacgtataagtattatgga
gtgtctaaaaataatgtgcccagatttccaatatatttgagagagagaccaaaggagtga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   GENOSCOPE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (18)   

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