KEGG   Paramecium tetraurelia: GSPATT00034096001
Entry
GSPATT00034096001 CDS       T01055                                 
Name
(RefSeq) hypothetical protein
  KO
K03018  DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6]
Organism
ptm  Paramecium tetraurelia
Pathway
ptm03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ptm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    GSPATT00034096001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ptm03021]
    GSPATT00034096001
Enzymes [BR:ptm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     GSPATT00034096001
Transcription machinery [BR:ptm03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Core subunits
     GSPATT00034096001
SSDB
Motif
Pfam: RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_1 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4
Other DBs
NCBI-GeneID: 5017802
NCBI-ProteinID: XP_001432018
Genoscope: GSPATT00034096001
UniProt: A0C1F3
Position
undetermined
AA seq 1360 aa
MYIKLNDIKRKIGGLQYSILSPQDAINLAEVKIFRDKNYDKMTGKNIEHGPLDLRMGQSL
RDTQCSSCTLLNECPGHFGYIPLQLPIYHLGFFTHVVKCLKCLCYKCGQVRLTPDEINQL
TQKMVHCIQTRSYNAQLKVFKKVLKKCRSNKQCPHCYCEQIGEAKKLAKGDAGKIILDTM
DINALYAWNQFSNIPKQHQFLFCINPFLNDLSDLLTSIIPAPPNNIRPSKMLSNTTKADE
DDLTMKLKTILYHNDLLQKQIKEGKDGMSILKTQFLTQAHYFHYFNSETPRLPQFSSKDG
KVDIRGIYQRLKGKRGRLRGNLSGKRAEFTARSVISPDPNLAIDQVTIPQHIACILTVPE
TVTALNIKKMRDYVQNGPSIYPGAKFVKLGGVNYNLQFARRAHLAYKLKIGDVVDRHLLS
EDIVIFNRQPSLHRISMMAFRARVDKWHTLRFNECVCTPFNADFDGDEMNIHLPQTYEAR
SEALILMDVKKNLKTIKSGESLVCLLQDFLTTAWLITNKDVFYSREQFMQFCAAFSDSNE
QIDLPAPTILKPKQLWTGKQVINALLVPNRKTRLVLNLEAKESNAFKGKLDYLWMDPGDG
YVVFDKCELVCGNIGKKVLGASKLGLFYALIRDNSTQIAASVMQRFAKLSSRWISHYGMT
IGIGDVMAPKSLIEQIHQSTEQSYLQCKHYQRSLIDADPGLTVEQTLEAKVNKTLSDVRE
QVGSKCQEQLKSDNKVLIMYLCGAKGSNVNVAQMIGCVGQQVISGKRVPEGFTGRTLPHF
KDYILHPKAKGFVKNSFYTGMDAIEFYFHNMAGREGLTDTAVKTATTGYMQRRLVKMLED
LHIAYDLTVRSCDTKEIVQFRYGEDGLDPLAVEDANEVIKLQNLLTNSFTVLRKNQILLN
KEHMLIKLDELFMIIEERHKKFLENYEATYEKEKKRVQALFKSTNQQVSEKQLQWFIRSW
MERFLTMVMAPGTSVGPITSQSIGEPATQMTLKTFHSAGVAGMSITQGVPRLNEIINASK
EIKTPQINVKLINRQVMDHAKQFAKSGDPQYEYAHRAVIHSAQQAQDVNIQIEQTKLMQI
LKKMDEIYTADNCYIELELDCHCLARLKLEFVTPKYVCALILKELKLSPDDVKYDLKIIR
ITVKKSSKKKQSENLLFLIKELQRKLLRLHIYGCANIKQTVIQVTDKDDKENVKGEARLF
ASGIGFKEILRLDNIDWKRTVSNHIMEIQSALGIEAARQSIVNEVYTTMQSHSISIDIRH
ILLLAELMTFKGRILGFTRQGIDQLKNSALMLASFEKTMDVFFNAAIQGKQDSMNGASQR
VIIGQNVPQGTGMFDLMFPVKENTILESTINQQKFLFASK
NT seq 4083 nt   +upstreamnt  +downstreamnt
atgtacatcaaattaaatgacattaagaggaagataggaggattgcaatactcaatattg
tccccacaagatgctatcaatttggcggaagtcaaaatctttagagacaaaaattatgat
aaaatgactgggaagaatattgaacatggtccacttgatttgcgtatgggtcaaagttta
cgagacactcaatgcagcagttgcacgctattgaatgaatgtcctggacatttcggatac
atccccttataattgccaatctatcacctcggctttttcactcacgtggtcaagtgcttg
aagtgtctctgttataaatgcggtcaagtaagattaacccctgacgagatcaatcaacta
acctaaaagatggtacattgcatataaacacgatcctacaatgcacagttgaaggtattc
aagaaggtcctcaaaaaatgcagatcaaacaaacagtgtccccattgctattgtgagcag
atcggagaagccaaaaaactagccaagggggatgcaggcaagatcatcctggacaccatg
gatattaatgcactgtatgcctggaatcaattctccaacatccctaaacaacatcaattc
ctgttttgcatcaaccctttcttaaacgatttgtctgatctcctcacttccatcataccc
gctccacccaacaacataagacccagcaaaatgctaagcaataccaccaaggcagacgaa
gacgatttgacgatgaagttgaaaaccatcctctaccacaacgatctgttgcagaagtag
ataaaggagggaaaggatggcatgtcaatcctcaaaacgtaattcttgactcaagcacat
tattttcattacttcaatagtgagacacctcgtttgccccaattctcaagcaaagatgga
aaggtggacatacgtggcatctatcagagactcaagggtaagagaggaagactaaggggt
aatctatccggtaagagagcagaattcactgcacgttcagtcatctctccagatcctaat
ttggctattgattaggtcaccattccatagcatattgcgtgcatcttgacagtacctgaa
actgtcaccgccttgaatattaagaagatgagagactacgtataaaatggaccctccatc
tatccaggagccaaattcgttaaattgggaggagtcaattacaatttgtaatttgcaaga
agggcgcatttagcctataagttaaagattggagatgtggtggatagacacttgttatca
gaggacattgtcatttttaatcgttagccgtcattgcatagaatttctatgatggccttc
agagctagggtggataagtggcacactcttcgattcaatgaatgtgtgtgtactccattc
aatgctgattttgacggagacgaaatgaacatacatttaccataaacctacgaagcaaga
tcagaagcattaattttgatggatgtcaagaagaatctcaaaactattaaaagtggtgaa
tcgctcgtttgtttactgtaagattttcttaccactgcctggttgataacaaataaggat
gtcttttattccagagaataatttatgtaattttgtgcggccttctctgattccaatgaa
caaatagatttgccagccccaacgatactaaaaccaaaataattatggacaggaaaataa
gtaatcaatgcattacttgtacctaacagaaagactagactagtgttgaatttagaagca
aaagaaagtaacgcatttaaaggaaagttggactatttgtggatggaccctggtgatggc
tatgtcgtatttgataaatgcgaattggtttgtggaaatataggtaagaaagtgctggga
gcatcgaaattagggttgttctacgcactcataagagataattctacttagatagcagca
tcagtaatgcagagattcgcaaaattgtcttccagatggatatcgcattatggaatgact
attggaattggtgatgtgatggcacccaaatctttaattgaatagatccattagagcact
gaatagagttacttgcaatgcaaacactattaacgaagtctaattgatgctgatcctggg
ttgacagttgagtagaccttggaagctaaggtgaataagactctatcagatgtgagagag
taagtgggttcaaagtgccaggagtaattgaagagtgataataaggtgttgattatgtat
ctgtgtggtgccaagggtagtaatgtcaatgtggcccagatgattggttgtgttggacaa
taagtcatatcaggaaagagagtcccagaaggattcacaggaaggacactcccacacttc
aaagattacatcttgcacccgaaagccaaagggtttgtcaagaatagtttttatacggga
atggatgcaattgagttctatttccataatatggctggaagagaagggttgacagatacc
gcagtcaagacagccactactggatatatgcaacgtaggctggttaagatgcttgaagat
ttacatattgcttatgatcttacagttcgatcttgtgacaccaaagagatagttcaattt
aggtatggagaagatggattggatcctctggcagtagaagatgcaaatgaggttatcaag
ctatagaaccttttgactaattcatttactgtcctcaggaagaatcaaatattgttgaat
aaagaacacatgctgatcaaattggatgaactatttatgataattgaggagagacacaag
aaattcttggaaaactatgaagccacttacgagaaagagaagaagagagtctaggcattg
tttaagagtaccaaccaataggtttctgaaaaataattgtaatggttcatcagaagttgg
atggaaagattcttaaccatggttatggcacctggtactagtgtgggacccatcacatct
caatccattggtgaacctgctactcaaatgactttgaagactttccactctgctggtgtt
gcaggaatgtccatcacttagggtgttcctcgtctaaatgaaatcatcaatgcaagtaag
gaaatcaaaacaccctaaattaatgtgaaattgatcaatcgccaggtcatggatcatgcc
aagtagttcgccaagtctggggatcctcaatatgagtatgctcatcgtgcagtcatccat
tctgcttagtaagcctaagatgtcaacatacaaatagagtaaaccaaattgatgtaaata
ctgaagaagatggatgaaatctacacagcagataattgctatatagaattagaattagat
tgtcattgtctagctagattgaaactagaatttgtgactcccaaatacgtgtgtgctctg
attttaaaagagttgaaattgtcacctgatgatgtcaaatatgatctcaaaattattaga
attacagttaaaaagagttctaagaagaaacaatcagaaaacctgctgtttttgatcaaa
gagctataacgaaaactattgaggttgcacatttatggttgtgcaaatatcaagtaaact
gttatctaggttacagataaggatgataaggagaatgtcaagggagaagccaggttgttt
gcatctggtattggattcaaagaaattctacgattggacaacattgattggaaacgaaca
gtcagtaatcacatcatggaaattcaaagtgctcttggaattgaagctgccagatagagt
attgtcaatgaagtgtacactaccatgtaaagtcacagcatttccattgatataagacac
atcctattgttagcagaattgatgacattcaaaggaagaatccttgggttcaccagacaa
ggaatagattaactaaagaattcagccttgatgcttgcttcctttgaaaaaacaatggac
gtcttttttaatgctgccatccaagggaagtaagattcgatgaatggtgcatctcaacga
gtaatcattggatagaatgtgcctcaaggaacaggaatgtttgatctgatgttccctgtt
aaagaaaatacaatcttggagagcacaatcaatcaatagaagtttttgtttgcttctaaa
tga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   GENOSCOPE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (43)   

Download RDF
DBGET integrated database retrieval system