KEGG   Planktomarina temperata: RCA23_c00540
Entry
RCA23_c00540      CDS       T03229                                 
Symbol
gatA1
Name
(GenBank) glutamyl-tRNA(Gln) amidotransferase subunit A
  KO
K02433  aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
Organism
ptp  Planktomarina temperata
Pathway
ptp00970  Aminoacyl-tRNA biosynthesis
ptp01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:ptp00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    RCA23_c00540 (gatA1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:ptp03029]
    RCA23_c00540 (gatA1)
Enzymes [BR:ptp01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.6  asparaginyl-tRNA synthase (glutamine-hydrolysing)
     RCA23_c00540 (gatA1)
    6.3.5.7  glutaminyl-tRNA synthase (glutamine-hydrolysing)
     RCA23_c00540 (gatA1)
Mitochondrial biogenesis [BR:ptp03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    RCA23_c00540 (gatA1)
SSDB
Motif
Pfam: Amidase
Other DBs
NCBI-ProteinID: AII85627
Position
56547..57857
AA seq 436 aa
MSAAALGRAIAKGDIDPVDLAQTYLDAIDAHPFRSRIYTIVTRDRALAEAQAASERARLG
QRKSALDGVPVSWKDLFDSANVATEAGSVLLENRTPTADCEVLRCATELGLVCLGKTHLS
ELAFSGLGYNPRTATPPCVNDHDAVSGGSSSGAAASVAFGLAPLAIGSDTGGSVRIPAAW
NDLVGLKTTSGRLSLEGVVPLCARFDTVGPLCRSVEDAALALAALEGSKPADLTNSTLEG
RRLAICDTVALDALRPEPRAAFDKAIDRLRAMGAVVERVDIPQVEEALYLSGVLFAAEAY
GTWKDTIEANPDLMYEEILMRFRGGADVSAPDYVAAWQKLDGLRADYYAATREFDAVLMP
SSPILPPNMERLARDHDYYVAENLLALRNTRIGNLMGACALTLPTGVPSCGLMMVCPPMQ
EHHLLRLGAAVENALA
NT seq 1311 nt   +upstreamnt  +downstreamnt
atgagtgccgcagccttgggccgcgcaattgccaagggtgatatagaccccgtcgatctg
gcgcagacctatcttgatgcgattgatgcccatcctttcagatcgcgcatttacaccata
gtgacgcgcgaccgggccttggctgaggcgcaggcggcgtctgaacgggcgcgtctggga
caacgcaaatctgcgctcgatggggttccggtgtcttggaaagatctgtttgacagcgca
aatgtggcgacagaagccggcagtgttttgcttgaaaatcgtacgccgacagcggattgc
gaggtgctgcgctgcgccaccgaattgggcttggtttgtttggggaaaacgcatctgtcc
gagttggccttctcaggtttggggtataaccccagaacggcgaccccgccttgtgtgaat
gatcatgacgctgtgtcaggcgggtcttcatctggagcggctgcttctgtggcctttggc
ttggcgcccttggcgattggatctgacactgggggctcggtgaggatcccggccgcctgg
aatgatttggtaggtttgaaaaccacgagcgggcgcttgtcgttggagggggtggttccg
ctttgcgcgcgctttgacacggttgggccgctgtgccgttcggttgaggatgcggctttg
gcgcttgcggctctagaaggcagtaaacccgcggatctgaccaacagcacattggagggg
cggcgtttggcgatctgtgacacagtggctttggatgcgctgcgcccggaaccgcgcgcc
gcttttgacaaggcgattgaccgtctgcgggcgatgggcgctgtggtcgagcgggttgac
attccgcaggtggaggaggctttgtacctgtcgggcgttttgtttgcggccgaagcctat
ggcacctggaaagatacaatagaggccaatccagacctcatgtatgaagagatcttgatg
cggtttcgaggtggggcggatgtttcggcgccagattatgttgcggcttggcaaaagtta
gacgggctgcgcgcagactactacgcggcaacccgagagtttgatgcagttttgatgccc
agctcaccgatccttccgccaaatatggaaagattggcacgggatcatgactattatgtg
gcggagaacctgctggcgctgcgcaacacccgcattggaaacctaatgggcgcatgcgct
ttgacgctgccgacgggcgttccgtcatgcggcctcatgatggtttgtccgccgatgcaa
gaacatcatctgctccgattgggcgctgcggtggaaaatgcgttggcttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (10)   
   KEGG COMPOUND (10)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (109)   
   KEGG ORTHOLOGY (1)   
   RefGene (106)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (130)   

Download RDF
DBGET integrated database retrieval system