KEGG   Planktomarina temperata: RCA23_c01440
Entry
RCA23_c01440      CDS       T03229                                 
Symbol
rafA
Name
(GenBank) alpha-galactosidase RafA
  KO
K07407  alpha-galactosidase [EC:3.2.1.22]
Organism
ptp  Planktomarina temperata
Pathway
ptp00052  Galactose metabolism
ptp00561  Glycerolipid metabolism
ptp00600  Sphingolipid metabolism
ptp01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:ptp00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00052 Galactose metabolism
    RCA23_c01440 (rafA)
  09103 Lipid metabolism
   00561 Glycerolipid metabolism
    RCA23_c01440 (rafA)
   00600 Sphingolipid metabolism
    RCA23_c01440 (rafA)
Enzymes [BR:ptp01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.22  alpha-galactosidase
     RCA23_c01440 (rafA)
SSDB
Motif
Pfam: Melibiase Glyco_hydro_36N Glyco_hydro_36C Melibiase_2
Other DBs
NCBI-ProteinID: AII85711
Position
complement(151929..154013)
AA seq 694 aa
MSQFWRLDGPLQTFILAAQQERLPQVIYWGPPLPTSDDCATLAAAHTMDVTGGMLDANPE
LSICPESSQSFPGQPGLMCRDAQGRVLRPKFRFVKDLAKEHSLCLTYADKDLGLTYEAHF
ELTASSNILTCWSRLEATQPLMLHWLAAPVFPAPQLSDSMMSFSGRWIGEFQTHSIPWRP
GIHKRESRTGRSGHEHFPGLILPEIGARNTIGRAYGFHYGWSGGHQMIAEELPDGRRQIQ
FGHACDSHNGPAQSFETAKLYAVFSDRGINGCGTGFQRHLRDHILTFPKASLPRPVHYNC
WEAIYFDHDLSSLKDIATRAKDLGAERFVLDDGWFGRRDDDNSSLGDWQIDPRKYPSGLD
PLIDHITSLGLQFGLWVEPEMVNPDSNLYRAHPDWILGQKDQLLGRQQLVLDMARDEVIA
YLYDCISAILETYDIGYLKWDHNRTLPLSDVTQTEGTYALLARLRAAFPHVEIESCASGG
GRIDFGILQHCQRVWLSDSNDALERSRIQHGAALFLPALVTGSHVGPRLCHTSGRVFDMR
YRAWVAAQRHMGFEMDPRELDAQEAQILTEVTQWYKDNRDWLATADILRLDTADPSVLAE
MQRAADGSRFVVFSNQLDSAQHILPRPLCLTELDPKAQYRLHLRNRNEATSLSRGAPLLK
SQDLQASGAWLMAHGVQLPYAMPGSIWVVEGRKL
NT seq 2085 nt   +upstreamnt  +downstreamnt
atgtcacagttttggcgcttagatgggccccttcaaaccttcattcttgcggcgcagcag
gagcggctgccgcaggtcatctattgggggccacccctgcccacatccgacgattgcgcc
acgctcgccgctgcccatacaatggatgtcacgggcggtatgctcgatgcgaacccagag
ctgtccatctgccccgaatccagccaatcctttcccggtcaaccgggtctcatgtgccgc
gatgcgcaggggcgcgtgctgcgcccaaagtttcgctttgtgaaggacctggcgaaagag
cacagcctatgtctcacctatgcagacaaagatttgggcctgacctatgaggcgcatttt
gaactgacagccagctcaaacatactcacctgctggagccgcttggaggcgacgcagccg
ctcatgctgcattggctggccgccccagtgtttcccgcgccacagttaagtgattccatg
atgagcttttccgggcgttggatcggcgaatttcaaacccactcaatcccttggcgcccc
ggcattcacaagcgcgagagccgcacaggccgcagcgggcatgaacatttccccggcctc
atcctccccgagattggcgcgcgcaacacaatcggccgggcctatgggtttcactatggc
tggtcaggtgggcatcaaatgatcgccgaagagctgcccgatgggcgccggcaaatccaa
tttggtcatgcctgcgacagccacaacggcccggcccagagttttgaaactgcgaaactc
tatgctgtgttttccgacagggggatcaatggctgtgggacaggttttcaaaggcacctg
cgcgatcatatcctaaccttcccgaaagcctccctgccgcgtccggtacattataattgc
tgggaagccatttattttgaccatgacttaagcagcctaaaggacatcgcaacccgcgcc
aaagatctgggtgccgagcggtttgttctcgatgacggctggtttggtcgccgcgatgat
gacaactcctcccttggcgattggcagattgatccgcgcaaatatccgagcggtttggat
ccgctgatcgatcatatcacatctctgggcctgcaattcggtctttgggttgagccggaa
atggtgaaccccgacagcaacctctatcgcgcccatcccgattggattctggggcaaaaa
gaccaactgcttgggcgccaacaactggtgctcgacatggcgcgcgatgaggtcatagcc
tatctgtatgactgcatctccgccatacttgagacctatgacattggctatttgaaatgg
gatcacaaccggaccttgcccctgtccgatgtgacccaaaccgagggcacctatgcgctt
ttggcccgcttgcgcgccgcttttccccatgtggagattgaaagctgcgcctctggcggc
gggcgcattgattttggcatattgcagcactgccagcgggtctggctgtcagacagcaat
gacgcgctcgaacgcagccgcattcaacatggcgcagcgttgtttttgcccgccctcgta
accggcagccacgttggtccacgcctgtgtcacacctcgggccgcgtgtttgacatgcga
taccgcgcttgggtcgccgcacaaaggcatatgggctttgaaatggacccgcgcgagctg
gacgcgcaagaggcgcagatcctcaccgaggtgacccaatggtacaaagacaaccgagac
tggctggccacagcggatatcctacgcttggataccgccgatccctcggttctggcagag
atgcagcgcgcagcggatgggtcgcgctttgtggtgttttccaatcaactggacagcgcg
caacacattctgccccgcccgctttgcttaaccgagcttgacccgaaagcccaatacagg
ctgcatctgcgcaaccgcaatgaggcgacgagcctatcacgcggggcgcccctgctcaaa
tcccaagacctgcaagcctctggagcttggttgatggcccatggggtgcagttgccctat
gccatgcctggctcaatatgggttgttgaaggccgaaaactctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (22)   
   KEGG COMPOUND (22)   
Chemical reaction (15)   
   KEGG ENZYME (1)   
   KEGG REACTION (14)   
Genome (1)   
   KEGG GENOME (1)   
Gene (46)   
   KEGG ORTHOLOGY (1)   
   RefGene (43)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (94)   

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