KEGG   Planktomarina temperata: RCA23_c20010
Entry
RCA23_c20010      CDS       T03229                                 
Name
(GenBank) hypothetical protein, lacI family HTH-type regulatory protein
  KO
K02529  LacI family transcriptional regulator, galactose operon repressor
Organism
ptp  Planktomarina temperata
Brite
KEGG Orthology (KO) [BR:ptp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ptp03000]
    RCA23_c20010
Transcription factors [BR:ptp03000]
 Prokaryotic type
  Helix-turn-helix
   LacI family
    RCA23_c20010
SSDB
Motif
Pfam: Peripla_BP_4 LacI HTH_IclR
Other DBs
NCBI-ProteinID: AII87532
Position
complement(2142946..2143968)
AA seq 340 aa
MKHPFALKEIALQSGLSLATVDRALHGRAHVSAQTARRVQAAIVELTGQEGQLAARGRRM
FIDIVVEAPRRFSDELRRAATQVLPKFAPAVVRPRFHFAEDSGPAKTVATLSKIAKQGSQ
GIVLKAQNVAPIRAEIDRLTDLKIPVVTVFTDCPDCARLAYVGLNNANAGRTAAYLFAQW
LQGRSGAVLTTTSRRQFQGEEARARAFAAEMARLCPQVSLREASGGAGLALGTAAQIRQA
VRGLDRLLGVYSMGGANAAILSTLAQVQLEPELFIAHDLDRENRSLLRQGRLAFVLHHDL
RADLDQAFQHITAYHKLRPPVLEGGPADVQIITPANCPRQ
NT seq 1023 nt   +upstreamnt  +downstreamnt
atgaaacatccttttgccctcaaagagattgcgctgcaatcgggcctgagtttggccacg
gtcgatcgcgccttgcatgggcgtgcccatgtcagtgcgcagactgcccggcgtgtgcag
gcggcgattgtggagttgacagggcaagaggggcaattggccgcgcgggggcggcggatg
ttcatagatatcgtggtcgaagcaccccggaggttttccgatgagctgcgccgggctgca
actcaagttctgccgaagttcgcgcccgcggtcgttcggccaaggtttcattttgcagag
gatagcgggccggcgaaaaccgtggcgaccctgtccaagattgccaagcagggcagtcag
ggcattgtgcttaaggcacaaaatgtcgcgccaattcgcgctgagattgaccggctgacc
gatttgaaaatccccgtggtgacagtcttcaccgattgcccggactgtgcgcgtttggcc
tatgtcgggttgaacaatgcaaatgcgggacgcaccgcagcctatctctttgcccaatgg
ctgcaaggtcgcagcggcgcagtattgaccacaacatcgcgccggcagtttcagggggaa
gaggcgcgggcacgggcctttgcggctgaaatggcgcgtttgtgcccgcaggtgagcctg
cgcgaggcaagcggcggggcagggctggcgcttggaacagcggcgcagatccgccaagcg
gtgcgtggattggatcgcctcctcggtgtctattcgatgggcggggccaatgcggccatt
ttatcgacgctggcacaggtgcagctcgaaccggaattgtttattgcccatgatttggac
cgcgagaaccgcagtttgctgcgccagggccggttggcattcgtcctgcatcacgatctt
cgcgcagatcttgaccaggcgttccaacatatcaccgcctatcacaagctgcgcccaccg
gtcttggagggtggcccggccgacgtgcaaatcatcacccccgcaaactgtccgcgccaa
tag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (26)   

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