KEGG   Psychroflexus torquis: P700755_000124
Entry
P700755_000124    CDS       T02275                                 
Name
(GenBank) excinuclease ABC subunit A UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
ptq  Psychroflexus torquis
Pathway
ptq03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ptq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    P700755_000124
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ptq03400]
    P700755_000124
DNA repair and recombination proteins [BR:ptq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     P700755_000124
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      P700755_000124
SSDB
Motif
Pfam: ABC_tran UvrA_inter UvrA_DNA-bind SMC_N AAA_29 AAA_16 AAA_21 nSTAND3 DnaJ_CXXCXGXG AAA_18 AAA_33 RsgA_GTPase AAA_24 nSTAND1 AAA_22 NACHT APS_kinase AAA_25 AAA_14 ATPase NB-ARC Viral_helicase1 cobW NTPase_1 MeaB AAA_23 DUF87
Other DBs
NCBI-ProteinID: AFU67192
UniProt: K4I987
Position
137311..140103
AA seq 930 aa
MKQINLDKFDPKEYIIIKGAKLHNLKNIDVVIPRNKLVVITGLSGSGKSTLAFDTLYAEG
QRRYVESLSAYARQFLGRLDKPKVDYIKGISPAIAIEQKVNSTNPRSTVGTSTEIYDYLK
LLYARVGKTLSPISGNEVKKHRVTDVIDFVKSLEEKQKLLLLAPVSLEKNRTIEEKIKIL
QQQGFSRIKVDHKILKISDALEQKISEKSELSIVVDRIVVKHDEDFYNRLADSIQNAFYE
GKGELNIEDVASSQLTNFNNKFELDGMQFTESSVHLFSFNNPVGACPKCEGYGDIVDIDE
ALVIPNTGLSVYEGCIAPWNGETLGWYKKELIKNAHKFDFPVHTPYFELTDEQKNIIWNG
NQYITGVNEFFVVVKSKAYKIQNRVLLSRYRGRTKCPECKGRRLKKETTYVKINDVNITD
LVDLPIDKVSEFFENLKLNEHDTIVAKRLLREINNRLKFLIDVGLTYLSLNRKSNTLSGG
ESQRINLATSLGSSLVGSMYILDEPSIGLHSKDNKRLIEVLKNLRDLGNTVIVVEHDEDI
MKAADYIIDIGPEAGTHGGDLVGKGSYKEILKGSSLTSSYLNGKKEIEIPKKRRKTKAFV
ELKGARENNLKNINVKVPLDCFVAITGVSGSGKSTLVKRILYPAMIKHNGGYGTKAGQFD
GIDGNFKHIKHIEYVDQNPIGRSSRSNPVTYIKAYDDIRNLFAKQKLSKIRDFRPKHFSF
NVEGGRCDTCEGEGEVTIEMQFMADVHLECEACYGKRFKQQVLDVKFEGKNIDDILSMTI
DDAMEFFSSHNETKISNKLEALQEVGLGYVALGQSSSTLSGGEAQRIKLASFLTKGKNAD
KTLFIFDEPTTGLHFHDISKLLKSFEALIENGHSVVVIEHNIDLIKCADHVIDLGPEGGI
NGGKLLAEGTPEQVAQVKSSFTGQYLKMKV
NT seq 2793 nt   +upstreamnt  +downstreamnt
atgaaacaaataaatttagataaattcgatcccaaagagtatattattattaaaggagcg
aaacttcacaatcttaaaaatattgatgttgttatacccagaaataagctagtcgttatt
acaggactatctggctctggaaaatctacattagcattcgacactctatatgcagaaggt
caaagacgctatgtagaaagcctttcagcttatgctaggcaatttcttggcagattagat
aagcctaaagtagattatattaaaggtatttcacccgcaatagctattgaacaaaaggtg
aattccacaaatcccagatctacagtaggaacctctactgaaatctatgactacctaaag
ttactatatgccagagtaggaaaaacgctctctcccatttctggcaatgaagttaaaaaa
catagagtcaccgatgtgattgactttgtaaagtcactcgaagaaaaacaaaaattacta
cttcttgctcctgtaagtttagaaaagaatagaactatagaggaaaaaataaaaatactt
cagcaacaaggctttagccgaattaaggttgatcataagatcttaaaaataagtgatgct
ttagagcaaaaaatatctgaaaagagcgaactttctatagttgtagatcgaattgttgtc
aagcatgacgaagatttttataaccgattagcagattcaattcaaaatgctttttacgaa
ggcaagggagaattgaatatcgaagatgtagcttctagccaactcaccaatttcaataat
aaatttgagctcgatggcatgcaattcacagaatccagtgtgcacctttttagcttcaat
aatcctgttggggcttgtcccaaatgcgaaggttatggcgatattgtagatattgatgaa
gctttagttattccaaatactggcttaagtgtatacgaaggatgtattgctccatggaat
ggagagactttaggttggtataaaaaagagttgataaaaaatgctcataaattcgatttt
ccagttcacacgccttattttgaattgacagacgaacaaaaaaatataatctggaatgga
aatcagtacataactggtgtcaatgagttttttgtagtggtaaaatccaaagcctataaa
attcaaaatagggttttattatccagataccgaggacgaaccaaatgtccagaatgtaaa
ggaagacgacttaaaaaagaaaccacctacgtcaaaattaacgacgttaatatcacagac
ctagtcgatttacctattgataaagtcagtgagttttttgaaaatctaaagcttaacgag
cacgatacaattgttgccaagcgcttattgagagaaatcaataataggcttaaattttta
atagatgtaggtttaacctacttatcgcttaaccgaaagtccaacaccctttctggtgga
gaatcccaacgtattaatttggctacctctttaggaagtagtctggtaggttccatgtat
attcttgacgaaccttccattggtctacattctaaagacaataaacgcttaattgaagtt
ttaaaaaacttaagagatctgggcaatacagttattgtggtagagcatgatgaagatata
atgaaagctgcagattatatcatagacattggcccagaagctggaactcatggaggggat
ctcgtcggcaagggaagttataaagagattctaaaaggatcctcactgacgtcttcgtac
ctcaatggaaaaaaagaaatcgaaatccctaaaaaaaggcgtaagacgaaagcttttgta
gaactaaaaggagccagagaaaacaacttaaaaaacatcaatgttaaagttcctttagat
tgttttgtagctatcacaggagtttctggaagtggtaaaagtacacttgttaaaagaatt
ctataccctgctatgattaagcataatggaggctacggaaccaaagctggacagtttgat
ggtattgacggaaacttcaagcacatcaaacatatagaatatgtagaccaaaatccgata
gggagatcctctagatctaaccctgtgacctatatcaaagcttatgatgatattcggaat
ttatttgccaagcaaaagctttctaaaatcagggatttcagaccaaaacatttcagtttt
aatgtagaaggaggtcgttgcgacacttgtgaaggtgaaggtgaagtgactatcgaaatg
caatttatggcagatgttcacttagaatgtgaagcttgttacggaaagcgctttaaacag
caagttctagatgtgaagtttgaaggtaaaaatatagatgacatcttatccatgacgatt
gatgatgctatggaatttttctcgtctcataatgaaacgaaaatttccaataagctggaa
gctctacaagaagtaggtttggggtatgtcgctttaggacaaagttcgtctactttatct
ggtggtgaagctcagcgtatcaaattagcttcatttcttaccaaaggtaaaaatgcagat
aagacccttttcatttttgatgagcccactacaggacttcattttcatgatatcagtaaa
ttgctgaaatcttttgaagcacttatagaaaatggccatagtgtagtggttattgaacat
aacatcgacttaataaaatgtgcagaccatgtgatcgatcttggtcctgaaggaggaata
aacgggggtaaattacttgccgaaggaactccggaacaagtcgcccaagtaaagtcctca
tttactggtcaatatttaaagatgaaagtgtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (63)   
   KEGG ORTHOLOGY (1)   
   RefGene (60)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (27)   
   Pfam (27)   
All databases (95)   

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