KEGG   Psychroflexus torquis: P700755_003705
Entry
P700755_003705    CDS       T02275                                 
Name
(GenBank) ATP-dependent DNA helicase RecQ
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
ptq  Psychroflexus torquis
Pathway
ptq03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ptq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    P700755_003705
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptq03019]
    P700755_003705
   03400 DNA repair and recombination proteins [BR:ptq03400]
    P700755_003705
Enzymes [BR:ptq01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     P700755_003705
Messenger RNA biogenesis [BR:ptq03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     P700755_003705
DNA repair and recombination proteins [BR:ptq03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      P700755_003705
SSDB
Motif
Pfam: DEAD Helicase_C RecQ_Zn_bind ResIII
Other DBs
NCBI-ProteinID: AFU70293
UniProt: K4IKF1
Position
complement(3928864..3930777)
AA seq 637 aa
MKPIPLDILKTYWGYDQFKPSQELAVDSILEQKDTCVFLPTGGGKSICFQVPALVEPGIC
IVISPLVALMQDQVENLKSRGIKAQLLKSGMSHVEVDQRLDNCIYGNYKFLYLSPERLQQ
ELVRERIRKMNVNFIAVDEAHCISQWGHDFRPAYRKIHLLKELQPSISIIALTATATEKV
KQDIITELELEDPAIILESFRRPNIALLTDFTADKMNALYSQLNIATENSIVYVRNRSAC
VELSEFLNKKGLRSTYFHGGISQTDKQKKLANWLKEDYPIMIATNAFGMGIDKANVRQVI
HYHLPESLESYYQEAGRAGRDGKPAKAIVLFNESDKQRLKNQFIKTIPSFEAIKNVYKAL
MSNFRIAYGEGENEVFDFNFYEFCSHYKLHTVLTYNTLNLLDRLSVISLDKSFQKKAKLK
FLVTSKAVIDFIDSHTRFALLIRTILRTYGGVFDNELTLNMQLIKKKTGYNDKEVYDQLE
ALKKHGILSAEFIKQDLSITFILPREDKYTLNPLRKYVNDYQNNKLQKAEMVLLYIEEKT
LCLQGFILKYFGEKESKPCGKCSVCLAVQAKRNPQLSSKYQDLNGYILEELKLSNLSSKE
LSLKIKYPKEALLESLQQLLESGKITLESNNTYSFNL
NT seq 1914 nt   +upstreamnt  +downstreamnt
atgaaaccgattcctctagatatactaaagacctattggggatatgatcagttcaaacct
tcacaggaacttgcagtagattctattttagaacaaaaagatacttgtgtgtttttacct
actggtggaggaaagtctatctgttttcaggtgcctgcactagtagaaccgggcatttgt
attgtgatatcgccattggtcgctttaatgcaagatcaagttgaaaatttaaaatctaga
ggaataaaagcacaactgcttaaaagtggcatgtcccatgtcgaggtagaccaaagacta
gataattgcatttatggcaactataaatttctatacctttctccagagcgacttcagcag
gaattggttagggagcgcatcagaaaaatgaatgttaattttatagctgtcgatgaagca
cattgtatttcacaatggggtcacgattttagacctgcttacagaaaaattcatttattg
aaggagttacagcctagtatttccatcatcgctcttacggccacagccacagagaaagtt
aaacaagatatcatcacagaacttgagcttgaagaccctgcgattattttggaaagtttt
cggcgacctaatattgctcttcttactgattttacggcagataaaatgaatgccttgtat
tcacaacttaacatcgccacagaaaacagcattgtctatgttagaaatcgatctgcctgt
gtagagttatctgagtttttaaataagaagggactccgctcgacttattttcatggtggt
atttcacaaacagacaaacaaaaaaaattagcgaactggttgaaagaagactatcctatt
atgatagcgaccaatgcttttggaatgggaatcgacaaagccaacgtaagacaagtgatc
cattaccatctgcctgaaagtttagaaagttattatcaggaagcaggaagagcaggtcgg
gatggaaagcctgctaaagctatcgtcttgttcaacgaaagtgacaagcagaggctcaaa
aatcagtttatcaaaaccatccctagtttcgaagccataaaaaatgtctataaagcttta
atgagcaacttcagaatagcatacggagagggagaaaatgaagttttcgatttcaatttt
tacgagttctgctcccattataagctacatacggtattaacctataatacactgaatctt
ttagacagactaagtgtcatcagtttggacaaatcttttcagaaaaaagcaaaattgaaa
tttttagtaaccagtaaggccgtgatagactttatagatagtcacacgcgatttgccttg
ttaatcagaactattttacgaacctatggaggagtgtttgacaatgagttgaccttaaac
atgcaactcataaaaaagaaaacaggttataatgacaaagaggtttatgaccaacttgaa
gctttaaaaaaacatggcatcctgtcagcggaatttatcaagcaagatttgagcattact
ttcattctccctcgtgaagataaatacactttgaatcctttaagaaagtatgtaaatgat
tatcaaaataacaagcttcaaaaagcagaaatggttttgctatacatcgaggaaaagacg
ctgtgtttacaaggttttattttgaagtattttggagaaaaagagtccaagccttgcgga
aaatgttctgtttgtttagcagttcaagccaaaagaaatccacaattatcttccaaatat
caagacttaaatggttatattttggaagaattaaagctgtccaacttaagttcaaaagaa
ctttctctgaagatcaaatatcccaaagaagcgctactggagtcgttacaacaacttctg
gaaagcgggaaaataacattagaatctaataacacctatagttttaacctatga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (43)   
   KEGG ORTHOLOGY (1)   
   RefGene (40)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (55)   

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