KEGG   Pan troglodytes (chimpanzee): 464834Help
Entry
464834            CDS       T01005                                 

Gene name
RXRA
Definition
retinoid X receptor, alpha
Orthology
K08524  
retinoid X receptor alpha
Organism
ptr  Pan troglodytes (chimpanzee)
Pathway
PPAR signaling pathway
PI3K-Akt signaling pathway
Thyroid hormone signaling pathway
Adipocytokine signaling pathway
Non-alcoholic fatty liver disease (NAFLD)
Bile secretion
Hepatitis C
Pathways in cancer
Transcriptional misregulation in cancer
Thyroid cancer
Small cell lung cancer
Non-small cell lung cancer
Brite
KEGG Orthology (KO) [BR:ptr00001]
 Environmental Information Processing
  Signal transduction
   04151 PI3K-Akt signaling pathway
    464834 (RXRA)
 Organismal Systems
  Endocrine system
   04920 Adipocytokine signaling pathway
    464834 (RXRA)
   03320 PPAR signaling pathway
    464834 (RXRA)
   04919 Thyroid hormone signaling pathway
    464834 (RXRA)
  Digestive system
   04976 Bile secretion
    464834 (RXRA)
 Human Diseases
  Cancers
   05200 Pathways in cancer
    464834 (RXRA)
   05202 Transcriptional misregulation in cancers
    464834 (RXRA)
   05216 Thyroid cancer
    464834 (RXRA)
   05222 Small cell lung cancer
    464834 (RXRA)
   05223 Non-small cell lung cancer
    464834 (RXRA)
  Endocrine and metabolic diseases
   04932 Non-alcoholic fatty liver disease (NAFLD)
    464834 (RXRA)
  Infectious diseases
   05160 Hepatitis C
    464834 (RXRA)
Transcription factors [BR:ptr03000]
 Eukaryotic Type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    464834 (RXRA)
Nuclear receptors [BR:ptr03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   464834 (RXRA)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
Position
9
AA seq 365 aa AA seqDB search
MNPVSSSEDIKPPLGLNGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKG
FFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKDRNE
NEVESTSSANEDMPVERILEAELAVEPKTETYVEANMGLNPSSPNDPVTNICQAADKQLF
TLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSA
HSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVY
ASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEA
PHQMT
NT seq 1098 nt NT seq  +upstreamnt  +downstreamnt
atgaaccccgtcagcagcagcgaggacatcaagccccccctgggcctcaatggcgtcctc
aaggtccccgcccacccctcaggaaacatggcttccttcaccaagcacatctgcgccatc
tgcggggaccgctcctcaggcaagcactacggagtgtacagctgcgaggggtgcaagggc
ttcttcaagcggacggtgcgcaaggacctgacctacacctgccgcgacaacaaggactgc
ctgattgacaagcggcagcggaaccggtgccagtactgccgctaccagaagtgcctggcc
atgggcatgaagcgggaagccgtgcaggaggagcggcagcgtggcaaggaccggaacgag
aatgaggtggagtcgaccagcagcgccaacgaggacatgccggtggagaggatcctggag
gctgagctggccgtggagcccaagaccgagacctacgtggaggcaaacatggggctgaac
cccagctcgccgaacgaccctgtcaccaacatttgccaagcagccgacaagcagcttttc
accctggtggagtgggccaagcggatcccacacttctcagagctgcccctggacgaccag
gtcatcctgctgcgggcaggctggaatgagctgctcatcgcctccttctcccaccgctcc
atcgccgtgaaggacgggatcctcctggccaccgggctgcacgtccaccggaacagcgcc
cacagcgcaggggtgggcgccatctttgacagggtgctgacggagcttgtgtccaagatg
cgggacatgcagatggacaagacggagctgggctgcctgcgcgccatcgtcctctttaac
cctgactccaaggggctctcgaacccggccgaggtggaggcgctgagggagaaggtctat
gcgtccttggaggcctactgcaagcacaagtacccagagcagccgggaaggttcgccaag
ctcttgctccgcctcccggctctgcgctccatcgggctcaaatgcctggaacatctcttc
ttcttcaagctcatcggggacacacccattgacaccttcctcatggagatgctggaggcg
ccgcaccaaatgacttag

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