KEGG   Pan troglodytes (chimpanzee): 471552
Entry
471552            CDS       T01005                                 
Symbol
HCN1
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1
  KO
K04954  hyperpolarization activated cyclic nucleotide-gated potassium channel 1
Organism
ptr  Pan troglodytes (chimpanzee)
Pathway
ptr04929  GnRH secretion
Brite
KEGG Orthology (KO) [BR:ptr00001]
 09150 Organismal Systems
  09152 Endocrine system
   04929 GnRH secretion
    471552 (HCN1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:ptr04040]
    471552 (HCN1)
Ion channels [BR:ptr04040]
 Voltage-gated cation channels
  Cyclic nucleotide-gated channel (HCN)
   471552 (HCN1)
SSDB
Motif
Pfam: Ion_trans Ion_trans_N cNMP_binding Ion_trans_2 DUF1759
Other DBs
NCBI-GeneID: 471552
NCBI-ProteinID: XP_526930
Ensembl: ENSPTRG00000016855
VGNC: 13507
UniProt: H2QQV0
Position
5:47044232..47487108
AA seq 884 aa
MEGGGKPNSSSNSRDDGNSVFPAKASATGAGPAAAEKRLGTPPGGGGAGAKEHGNSVCFK
VDGGGGGGEEPAGGFEDAEGPRRQYGFMQRQFTSMLQPGVNKFSLRMFGSQKAVEKEQER
VKTAGFWIIHPYSDFRFYWDLIMLIMMVGNLVIIPVGITFFTEQTTTPWIIFNVASDTVF
LLDLIMNFRTGTVNEDSSEIILDPKVIKMNYLKSWFVVDFISSIPVDYIFLIVEKGMDSE
VYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRIFNLIGMML
LLCHWDGCLQFLVPLLQDFPPDCWVSLNEMVNDSWGKQYSYALFKAMSHMLCIGYGAQAP
VSMSDLWITMLSMIVGATCYAMFVGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPAD
MRQKIHDYYEHRYQGKIFDEENILNELNDPLREEIVNFNCRKLVATMPLFANADPNFVTA
MLSKLRFEVFQPGDYIIREGAVGKKMYFIQHGVAGVITKSSKEMKLTDGSYFGEICLLTK
GRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVAIDRLDRIGKKNSILLQKFQ
KDLNTGVFNNQENEILKQIVKHDREMVQAIAPINYPQMTTLNSTSSTTTPTSRMRTQSPP
VYTATSLSHSNLHSPSPSTQTPQPSAILSPCSYTTAVCSPPVQSPLAARTFHYASPTASQ
LSLMQQQPQQQVQQSQPPQTQPQQPSPQPQTPGSSTPKNEVHKSTQALHNTNLTREVRPL
SASQPSLPHEVSTLISRPHPTVGESLASIPQPVTAVPGTGLQAGGRSTVPQRVTLFRQMS
SGAIPPNRGVPPAPPPPAAALPRESSSVLNTDPDAEKPRFASNL
NT seq 2655 nt   +upstreamnt  +downstreamnt
atggaaggaggcggcaagcccaactcttcgtctaacagccgggacgatggcaacagcgtc
ttccccgccaaggcgtccgcgacgggcgcggggccggccgcggccgagaagcgcctgggc
acaccgccggggggcggcggggccggcgcgaaggagcacggcaactccgtgtgcttcaag
gtggacggcggcggcggcggcggcgaggagccggcggggggcttcgaagacgccgagggg
ccccggcggcagtacggcttcatgcagaggcagttcacctccatgctgcagcccggggtc
aacaaattctccctccgcatgtttgggagccagaaggcggtggaaaaggagcaggaaagg
gttaaaactgcaggcttctggattatccacccttacagtgatttcaggttttactgggat
ttaataatgcttataatgatggttggaaatctagtcatcataccagttggaatcacattc
tttacagagcaaacaacaacaccatggattattttcaatgtggcatcagatacagttttc
ctattggacctgatcatgaattttaggactgggactgtcaatgaagacagttctgaaatc
atcctggaccccaaagtgatcaagatgaattatttaaaaagctggtttgtggttgacttc
atctcatccatcccagtggattatatctttcttattgtagaaaaaggaatggattctgaa
gtttacaagacagccagggcacttcgcattgtgaggtttacaaaaattctcagtctcttg
cgtttattacgactttcaaggttaattagatacatacatcaatgggaagagatattccac
atgacatatgatctcgccagtgcagtggtgagaatttttaatctcatcggcatgatgctg
ctcctgtgccactgggatggttgtcttcagttcttagtaccactactgcaggacttccca
ccagattgctgggtgtctttaaatgaaatggttaatgattcttggggaaagcagtattca
tacgcactcttcaaagctatgagtcacatgctgtgcattgggtatggagcccaagcccca
gtcagcatgtctgacctctggattaccatgctgagcatgatcgtcggggccacctgctat
gccatgtttgttggccatgccaccgctttaatccagtctctggattcttcgaggcggcag
tatcaagagaagtataagcaagtggaacaatacatgtcattccataagttaccagctgat
atgcgtcagaagatacatgattactatgaacacagataccaaggcaaaatctttgatgag
gaaaatattctcaatgaactcaatgatcctctgagagaggagatagtcaacttcaactgt
cggaaactggtggctacaatgcctttatttgctaatgcggatcctaattttgtgactgcc
atgctgagcaagttgagatttgaggtgtttcaacctggagattatatcatacgagaagga
gccgtgggtaaaaaaatgtatttcattcaacacggtgttgctggtgtcattacaaaatcc
agtaaagaaatgaagctgacagatggctcttactttggagagatttgcctgctgaccaaa
ggacgtcgtactgccagtgttcgagctgatacatattgtcgtctttactcactttccgtg
gacaatttcaacgaggtcctggaggaatatccaatgatgaggagagcctttgagacagtt
gccattgaccgactagatcgaataggaaagaaaaattcaattcttctgcaaaagttccag
aaggatctgaacactggtgttttcaacaatcaggagaacgaaatcctcaagcagattgtg
aaacatgacagggagatggtgcaggcaatcgctcccatcaattatcctcaaatgacaacc
ctgaattccacatcgtctactacgaccccgacctcccgcatgaggacacaatctccaccg
gtgtacacagcgaccagcctgtctcacagcaacctgcactctcccagtcccagcacacag
accccccagccatcagccatcctgtcaccctgctcctacaccaccgcggtctgcagccct
cctgtacagagccctctggccgctcgaactttccactatgcctccccaaccgcctcccag
ctgtcactcatgcaacagcagccgcagcagcaggtacagcagtcccagccgccgcagact
cagccacagcagccgtccccgcagccacagacacctggcagctccacgccgaaaaatgaa
gtgcacaagagcacgcaggcgcttcacaacaccaacctgacccgggaagtcaggcccctc
tccgcctcgcagccctcgctgccccatgaggtgtccactctgatttccagacctcatccc
actgtgggcgagtccctggcctccatccctcaacccgtgacggcggtccccggaacgggc
cttcaggcagggggcaggagcactgtcccgcagcgcgtcaccctcttccgacagatgtcg
tcgggagccatcccccccaaccgaggagtccctccagcaccccctccaccagcagctgct
cttccgagagaatcttcctcagtcttaaacacagacccagacgcagaaaagccacgattt
gcttcaaatttatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

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