KEGG   Pan troglodytes (chimpanzee): 472500
Entry
472500            CDS       T01005                                 
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase SSU72
  KO
K15544  RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
Organism
ptr  Pan troglodytes (chimpanzee)
Pathway
ptr03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ptr00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    472500
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ptr03021]
    472500
   03019 Messenger RNA biogenesis [BR:ptr03019]
    472500
Enzymes [BR:ptr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     472500
Transcription machinery [BR:ptr03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     472500
Messenger RNA biogenesis [BR:ptr03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     472500
SSDB
Motif
Pfam: Ssu72 LMWPc NYN_YacP
Other DBs
NCBI-GeneID: 472500
NCBI-ProteinID: XP_016813588
Ensembl: ENSPTRG00000048973
UniProt: A0A6D2VYE8 A0A2I3SQT0
Position
7:121404280..121406060
AA seq 194 aa
MLSSPLRVAVVCVSNINRSMEAHSILRRKGLSVRSFGTESHVRLPGRRRNHPVVYDFATT
YKEMYNDLLRKDRECYTHNGILHILGRNERIKPGPERFQECTEFFDVIFTCEERVYDTVV
EDLCSREQQTFQPVHVINMDIEDTLEGATLGAFLICEICQCLQQSDDMEDSLEELLLQME
EKAGKSFLHTVCFY
NT seq 585 nt   +upstreamnt  +downstreamnt
atgctctcctccccactcagggtggctgtggtgtgtgtgagcaacatcaacaggagcatg
gaggcccacagcatcctcaggagaaaagggctaagtgtccggtcttttggaactgaatct
catgtgaggctaccaggacgaagacgcaatcatcctgtagtttacgattttgcaacaaca
tataaggagatgtacaatgacctcctcaggaaagacagagaatgctacacccacaatgga
atcttacacatcttgggaagaaatgagagaatcaagcctggcccagaaagatttcaggaa
tgcactgaattctttgatgtcatcttcacctgtgaggagcgtgtctatgacacagtggtg
gaagatctgtgttccagagaacagcagacctttcagcctgtgcacgtgatcaacatggac
atcgaagataccctggaaggtgccaccctgggagcattcctcatctgtgagatttgccag
tgcctgcagcagtccgacgacatggaagacagtctggaggagctgctgttgcaaatggag
gagaaggcaggaaaaagctttcttcacaccgtctgcttctactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (19)   

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