KEGG   Candidatus Pelagibacter ubique: SAR11_0488Help
Entry
SAR11_0488        CDS       T00257                                 

Gene name
trpB
Definition
tryptophan synthase subunit beta (EC:4.2.1.20)
Orthology
K01696  
tryptophan synthase beta chain [EC:4.2.1.20]
Organism
pub  Candidatus Pelagibacter ubique
Pathway
Glycine, serine and threonine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites
Biosynthesis of amino acids
Module
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:pub00001]
 Metabolism
  Overview
   01230 Biosynthesis of amino acids
    SAR11_0488 (trpB)
  Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    SAR11_0488 (trpB)
   00400 Phenylalanine, tyrosine and tryptophan biosynthesis
    SAR11_0488 (trpB)
Enzymes [BR:pub01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.20  tryptophan synthase
     SAR11_0488 (trpB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(477136..478368)
Genome map
AA seq 410 aa AA seqDB search
MKLKKKIPLIDQHNKNGFWGGKFGGNFIPETLKKPIEDLTELFEKLRYDKKFLKERDYYF
KNYIGSPTSFIKLQNLSDHLSGAQIYAKMVSEANGGAHKIYNATVHCLIAKKAGKKYVVG
DTGAGYAGKMLSMAAKKFGLKCKIFMGAKDIKRQKPNVDAMKKNGAEVVPVYSGSQTLVD
AVSECMRYWVSNCDNTHMCVGSTVGPNIFVKICGWSTAQISRELKVQIQSEFKKMPKKIK
LINCVGGGSSAYGFWSEFIDYDKKQIELIGVEAGGPKNSKLHAAPLTNGAKLGILHGAAA
YVCQNSEGQINDTASISAGLDYPGVSPIHCFLKDTKRARYTSATDEAALNAYKLVTKLEK
INPSLEPSHAFAEAIKIAPKLNKDTIIIVNSCGDAKKDRDILKERLGKIN
NT seq 1233 nt NT seq  +upstreamnt  +downstreamnt
atgaaacttaaaaaaaaaattcctttaattgatcagcacaacaaaaatggattttggggt
ggtaaatttggtggaaattttatacctgaaacattaaaaaagcccattgaggatttaact
gaactttttgaaaaacttagatacgataaaaaatttcttaaagaaagagactattatttt
aagaattatataggctctcctacttcatttattaaacttcaaaacctatcagatcactta
agtggagctcaaatatatgccaaaatggtgtctgaggcgaacggaggagctcataaaatt
tataatgcaacagttcattgccttattgctaaaaaggcagggaaaaaatatgtcgttggt
gatacgggtgcagggtatgctggaaagatgctgagtatggctgctaaaaaatttggcctt
aaatgcaaaatattcatgggtgcaaaggatattaaaagacaaaagcctaatgtagatgca
atgaaaaagaatggtgcagaagttgtacctgtttattcaggaagccaaacattagtagat
gctgtcagtgaatgcatgcgttattgggtttcaaattgcgataacacccatatgtgtgtt
ggatcaacagtaggccctaatatatttgttaaaatttgtggctggagtacagctcaaatt
tcaagagaattgaaagttcaaattcagtcagaatttaaaaagatgcctaaaaaaattaaa
ctcattaattgtgttggaggtggaagttcagcttatgggttttggagtgagtttattgat
tatgacaaaaaacagattgaattaattggtgttgaagctggtggaccaaaaaattcaaaa
ctacatgcagcacctctaactaatggagctaaacttgggatattgcatggagctgcagct
tatgtttgtcaaaatagtgaaggacaaattaacgataccgcttctatttctgctggatta
gattatcctggggtatcccctattcactgcttcttaaaagatactaaaagagcaagatat
acatctgcaactgatgaggcggctttaaatgcatacaaactagttacaaaacttgaaaaa
ataaacccaagtcttgaacctagtcatgcttttgctgaagctataaaaattgctccaaaa
ttaaacaaagatactatcattattgttaattcttgtggtgatgccaaaaaggatcgtgat
attttaaaagaaagattgggaaaaattaactaa

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