KEGG   Candidatus Pelagibacter ubique: SAR11_0488Help
Entry
SAR11_0488        CDS       T00257                                 

Gene name
trpB
Definition
tryptophan synthase subunit beta (EC:4.2.1.20)
Orthology
K01696  
tryptophan synthase beta chain [EC:4.2.1.20]
Organism
pub  Candidatus Pelagibacter ubique
Pathway
Glycine, serine and threonine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites
Biosynthesis of amino acids
Module
Tryptophan biosynthesis, chorismate => tryptophan
Class
Metabolism; Overview; Biosynthesis of amino acids [PATH:pub01230]
Metabolism; Amino acid metabolism; Glycine, serine and threonine metabolism [PATH:pub00260]
Metabolism; Amino acid metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:pub00400]
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(477136..478368)
Genome map
AA seq 410 aa AA seqDB search
MKLKKKIPLIDQHNKNGFWGGKFGGNFIPETLKKPIEDLTELFEKLRYDKKFLKERDYYF
KNYIGSPTSFIKLQNLSDHLSGAQIYAKMVSEANGGAHKIYNATVHCLIAKKAGKKYVVG
DTGAGYAGKMLSMAAKKFGLKCKIFMGAKDIKRQKPNVDAMKKNGAEVVPVYSGSQTLVD
AVSECMRYWVSNCDNTHMCVGSTVGPNIFVKICGWSTAQISRELKVQIQSEFKKMPKKIK
LINCVGGGSSAYGFWSEFIDYDKKQIELIGVEAGGPKNSKLHAAPLTNGAKLGILHGAAA
YVCQNSEGQINDTASISAGLDYPGVSPIHCFLKDTKRARYTSATDEAALNAYKLVTKLEK
INPSLEPSHAFAEAIKIAPKLNKDTIIIVNSCGDAKKDRDILKERLGKIN
NT seq 1233 nt NT seq  +upstreamnt  +downstreamnt
atgaaacttaaaaaaaaaattcctttaattgatcagcacaacaaaaatggattttggggt
ggtaaatttggtggaaattttatacctgaaacattaaaaaagcccattgaggatttaact
gaactttttgaaaaacttagatacgataaaaaatttcttaaagaaagagactattatttt
aagaattatataggctctcctacttcatttattaaacttcaaaacctatcagatcactta
agtggagctcaaatatatgccaaaatggtgtctgaggcgaacggaggagctcataaaatt
tataatgcaacagttcattgccttattgctaaaaaggcagggaaaaaatatgtcgttggt
gatacgggtgcagggtatgctggaaagatgctgagtatggctgctaaaaaatttggcctt
aaatgcaaaatattcatgggtgcaaaggatattaaaagacaaaagcctaatgtagatgca
atgaaaaagaatggtgcagaagttgtacctgtttattcaggaagccaaacattagtagat
gctgtcagtgaatgcatgcgttattgggtttcaaattgcgataacacccatatgtgtgtt
ggatcaacagtaggccctaatatatttgttaaaatttgtggctggagtacagctcaaatt
tcaagagaattgaaagttcaaattcagtcagaatttaaaaagatgcctaaaaaaattaaa
ctcattaattgtgttggaggtggaagttcagcttatgggttttggagtgagtttattgat
tatgacaaaaaacagattgaattaattggtgttgaagctggtggaccaaaaaattcaaaa
ctacatgcagcacctctaactaatggagctaaacttgggatattgcatggagctgcagct
tatgtttgtcaaaatagtgaaggacaaattaacgataccgcttctatttctgctggatta
gattatcctggggtatcccctattcactgcttcttaaaagatactaaaagagcaagatat
acatctgcaactgatgaggcggctttaaatgcatacaaactagttacaaaacttgaaaaa
ataaacccaagtcttgaacctagtcatgcttttgctgaagctataaaaattgctccaaaa
ttaaacaaagatactatcattattgttaattcttgtggtgatgccaaaaaggatcgtgat
attttaaaagaaagattgggaaaaattaactaa

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