KEGG   Candidatus Pelagibacter ubique: SAR11_1111
Entry
SAR11_1111        CDS       T00257                                 
Symbol
rpsC
Name
(GenBank) 30S ribosomal protein S3
  KO
K02982  small subunit ribosomal protein S3
Organism
pub  Candidatus Pelagibacter ubique
Pathway
pub03010  Ribosome
Brite
KEGG Orthology (KO) [BR:pub00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    SAR11_1111 (rpsC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:pub03011]
    SAR11_1111 (rpsC)
Ribosome [BR:pub03011]
 Ribosomal proteins
  Mitochondria/ Chloroplast
   Small subunit
    SAR11_1111 (rpsC)
  Bacteria
    SAR11_1111 (rpsC)
  Archaea
    SAR11_1111 (rpsC)
SSDB
Motif
Pfam: Ribosomal_S3_C KH_2 VAR1 CHIPS IFNGR1_transm DUF3403
Other DBs
NCBI-ProteinID: AAZ21914
UniProt: Q4FLM4
Position
complement(1067108..1067788)
AA seq 226 aa
MGQKVNPVGFRLGVNRGWDSVWYAKKKDFGNYLIEDFKIRAYIKKNVVNSGVSKVMIERT
SNKCFVTIYTSRPGFVIGKKGSDIDKIKNNLSKFTNNEVTLNIKEVKKPETNAYLVAENI
AQQLVKRISYRRAMKRAMQSCLRLGAKGIKVSISGRLGGNEIARTEWLREGSIPSHTLRA
DIDYAEAEALTTFGIIGIKIWIYKGEVFAKEFSQETNKIVPKEVKE
NT seq 681 nt   +upstreamnt  +downstreamnt
atgggtcaaaaagttaatcctgttggtttcagactaggtgtaaacagaggttgggattct
gtctggtatgcaaaaaagaaagattttggaaattatcttatcgaagattttaagatcaga
gcatatatcaagaaaaatgttgttaattctggtgtatctaaagttatgatagagagaacc
tctaataaatgttttgttactatttacacatcaagacctggatttgtaattggaaagaaa
ggtagcgatattgataaaataaaaaacaatttatctaaatttactaacaatgaagtaaca
cttaatattaaagaagttaaaaagccggaaacaaatgcttatttagttgctgaaaatata
gcacaacaattagttaaaagaatatcatatagaagagccatgaagagagctatgcaatca
tgtttaagacttggtgcaaaaggcattaaagtttctattagtggtagactaggtggaaat
gaaatagctagaactgaatggttaagagaaggaagtataccatcacatactttaagagca
gatattgactatgcagaagctgaagcattaacaacatttggtattattggaataaaaatt
tggatttataaaggtgaagtattcgctaaagaatttagccaagaaactaacaagatagtt
ccaaaagaggttaaagaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (1090)   
   KEGG ORTHOLOGY (1)   
   RefGene (1087)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (6)   
   Pfam (6)   
All databases (1102)   

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