KEGG   Parachlamydia acanthamoebae: PUV_10100
Entry
PUV_10100         CDS       T01552                                 
Symbol
rnr-A
Name
(GenBank) ribonuclease R
  KO
K12573  ribonuclease R [EC:3.1.13.1]
Organism
puv  Parachlamydia acanthamoebae
Pathway
puv03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:puv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PUV_10100 (rnr-A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:puv03019]
    PUV_10100 (rnr-A)
   03016 Transfer RNA biogenesis [BR:puv03016]
    PUV_10100 (rnr-A)
Enzymes [BR:puv01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     PUV_10100 (rnr-A)
Messenger RNA biogenesis [BR:puv03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     PUV_10100 (rnr-A)
Transfer RNA biogenesis [BR:puv03016]
 Prokaryotic type
  tRNA degradation factors
   PUV_10100 (rnr-A)
SSDB
Motif
Pfam: RNB CSD2 OB_RNB S1 TOBE_2 Rho_RNA_bind
Other DBs
NCBI-ProteinID: CCB85960
UniProt: F8KYK5
Position
1106690..1108984
AA seq 764 aa
MPKKVSSDKKKVVSISKKPKKSKKEEKLFQNFLKTVEQFIGGKAFFPATFSELSQKLQIH
PQHIEIFQEVLDALVAKGVTQLSQGKYIAKKTHTDVISGIIHMHPRGFGFVQPDDPSVCD
QDIFIPRPHTQNAVDGDKVEVVIDTLAISEKGPEGKVIAIVERGRTHIAGIIRTVYPNGA
VYAYVPLLGTSQQVVVQQAEGKPLQVGDRVIMEVVDWGDKKNETTCRMSHYLGHISDPAC
DIPAAIEEYELRADFPSKALTEAKDFGKVVSKKDLVDREDLRDVECFTIDPDTAKDFDDA
LSLAKSEDGHFHLGVHIADVSHYVQQGSALDLEASRRGNSTYFPGYCLPMLPHELSSNLC
SLRANVNRLTVSVHIHFDPEGNMLDYRISRSVIKSKKRMTYREAKQILDGQKKSPYEPTL
QLMVELCYKLKRKRYERGSIEFAMPDLVVKVNENGVPQGLDLVVYDITHQLVEEFMLKAN
EVIALHLDQEGKNLPYRIHDVPSSENMRDFSFLTSAFGFHLSEAPTPSELQKLFDEALET
PYGQYLATSYIRRMRLAVYSPANIGHYGLGLTHYCHFTSPIRRYVDLIIHRLLFGLEADL
PHLEMVAAQCSEQERLSAKAEGSVVLLKKYRLLQEIKQQDPYKQYDAVITRVKNFGFFFE
VLDFMLEGFLHVSEIGNDYYLYDEPSLSLKGTRTGQGFTSGTKISVILKEIDFITLESKW
HFVQAEPTEKKSPKGSSKRKGKNFTSAKKKPSKSPSKSRPRKRK
NT seq 2295 nt   +upstreamnt  +downstreamnt
atgccaaaaaaagtctcaagtgacaaaaaaaaagtcgtctccatctctaaaaaacctaaa
aaatctaaaaaagaggaaaagctgtttcaaaatttccttaaaactgtcgaacagtttatt
ggaggaaaagcattttttcctgcgactttttctgaattaagtcaaaagcttcaaattcat
ccccagcacatcgaaatatttcaagaagttttagatgctctagttgcaaaaggggtcacc
cagctttctcaaggaaagtacattgccaaaaaaacacatacagatgtgattagcggaatt
attcatatgcatccccgtggttttggttttgtacaacccgacgatccttcggtgtgcgat
caagatatttttatccctcgtcctcatacacaaaatgctgtggatggcgataaggttgag
gtcgtcatcgatacacttgcaatttctgaaaaaggaccagaaggcaaagttatcgcgatt
gttgaacgcggtcggacacacattgcaggaattatccgaacagtttatcccaatggcgcc
gtttatgcctatgtgcctttacttgggacgtctcaacaagttgtcgttcaacaagcagag
ggcaaacctttgcaagttggtgatcgcgtgatcatggaagtcgtggactggggagataaa
aagaatgaaacgacctgtcgcatgtctcactatttagggcacatttccgatcccgcatgc
gatattcctgcagctattgaagagtacgagcttcgagcagatttcccttccaaagctttg
acagaagctaaagattttgggaaggttgtatcgaaaaaagatctggtcgatcgagaagat
ttaagagatgttgaatgttttacaattgatcccgatacagcaaaagattttgacgatgct
ttgagtcttgcgaagagtgaagatgggcattttcatttaggcgtacatatcgcggatgtg
tcccactatgtgcaacaaggatcggcattggatcttgaggcaagccgtcgcgggaactca
acctactttccaggctattgcttaccaatgcttccacacgaattgtctagcaatttgtgc
agtttaagagcgaatgtgaatcgtctaactgtttccgtacatatccactttgatccggaa
gggaatatgctggactaccgcatttctcgctctgtgatcaaaagcaaaaagcggatgact
tatagagaagctaagcaaatcttggatggtcagaaaaaaagtccttatgaaccgactttg
cagctgatggttgagctttgttacaaactcaaacgcaaacgttatgaaagaggtagcatt
gaatttgcgatgccagatctcgtggttaaggtaaatgaaaacggtgttccacaaggatta
gacctggttgtttatgatattacgcaccagcttgtcgaagaatttatgttgaaagcgaat
gaagtaattgctctgcatcttgatcaagaaggaaaaaatctcccttaccgaattcacgat
gtgccttcttctgaaaacatgcgcgatttttcctttttgacaagtgcctttggttttcat
ttgtctgaagcgcctacaccttccgagctacaaaaactatttgatgaagctttagagact
ccctatggacagtatttagcgacttcttacatccggcgcatgcgtctggctgtttattct
ccagcaaatattgggcattatgggctaggactaacgcattattgccactttacgagccct
attcgccgttatgtggatctgattattcatcgtcttttatttggtttagaggcagacctt
cctcatttagagatggttgcagcgcagtgctcagaacaagagcggttaagtgctaaagcg
gaaggaagcgttgttttattaaagaaataccgtcttctccaagaaatcaagcagcaagat
ccttataaacaatatgacgctgtgatcacacgcgtcaaaaattttggtttcttttttgaa
gttcttgattttatgcttgagggattcttgcatgtctctgaaatcggaaatgattactat
ttatatgatgagccttctttaagtcttaaaggaacacgcacgggtcagggttttacttct
ggaacaaaaatttctgtgattttaaaggagattgattttatcactctggaaagtaagtgg
cattttgttcaggcagagccaacagaaaaaaaatctccaaagggatcatcgaaacgaaag
ggaaaaaattttacaagcgcgaaaaagaagccctccaaatctccatcaaaaagtcgtccg
cgtaaaagaaaataa

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