KEGG   Pantoea vagans C9-1: Pvag_0186
Entry
Pvag_0186         CDS       T01326                                 
Symbol
hrpB
Name
(GenBank) ATP-dependent RNA helicase hrpB
  KO
K03579  ATP-dependent helicase HrpB [EC:5.6.2.6]
Organism
pva  Pantoea vagans C9-1
Brite
KEGG Orthology (KO) [BR:pva00001]
 09190 Not Included in Pathway or Brite
  09191 Unclassified: metabolism
   99980 Enzymes with EC numbers
    Pvag_0186 (hrpB)
Enzymes [BR:pva01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     Pvag_0186 (hrpB)
SSDB
Motif
Pfam: HrpB_C DEAD Helicase_C AAA_22 HA2_N ResIII
Other DBs
NCBI-ProteinID: ADO08406
UniProt: E1SDW1
Position
202364..204847
AA seq 827 aa
MRAILAQAEAEFAVSDLPVSAVLPDILAALRDASQILLAAPTGAGKSTWLPLQLLQQAAL
PGRIIMLEPRRLAARNVAQRLAEQLGEQPGATVGFRMRGESCVGPETRLEVVTEGMLTRM
LQHDPMLEGVSLVILDEFHERSLQADLALALLLDVQQGLRDDLKIMLMSATLDNARLAAL
LPDAPLIISEGRSYPVERRYASLNQNVRFEEAVAREVAQLLRDEEGSLLLFLPGVAEIER
VKRELESRISDDVDLTPLYGALPLAAQRRAILPAAAGRRKVVLATNIAETSLTIEGIRLV
VDSALERSALFDARSGVTRLQTQRISQASMIQRAGRAGRLMPGICLHLLPQEQASRAAAQ
SEPEIVNSDLSSLWLDLLQWGCTGPQQLQWLDQPPARNLDAAQRQLTRLGALDSNGLLNT
LGRRMAQLGCDPRLAAMLCAAGDEPDAVASVALLVAILEDPPRSGSADLRDALHRPQAQW
QRRAQQWQQRLKIRGGRVDEDRLAGLLAVGFGDRLARRRDQSGRYQLANGLGARLDEQDG
LTRNEWLIAPALLQGSATPDARMLLALPVDIETLCQQQPALIERRTEVEWDEEKGTLRAF
RREQIGALILKTQPMARPEPDVLHAAILRWIAEKGLSVLGWTPDAEQLRLRIQCAAQWLP
EESWPAMDDESLFASLSEWLLPQMSAVRDLRSLQAVNLTTALLHLLTWSQRQRLDSVLPT
HYTVPTGSRLPIRYDADKPPALAVRIQEMFGEAQNPTVAEGRIPLVLELLSPAQRPLQIT
RDLAAFWRGAWPEVRKEMKGRYPKHLWPEDPATALPTRRTKKMSPQG
NT seq 2484 nt   +upstreamnt  +downstreamnt
atgcgcgccatcttagcacaggcagaagcggagtttgctgtgagcgatttaccagtcagc
gcggtgctgccagacatcctggcggcgctgcgtgacgcctctcaaatcctgctggccgcc
cctaccggcgcgggcaaatcgacctggctcccgctgcagttgttgcagcaggcggcgctg
ccaggacgcatcattatgctggagccacgccggctggcggcacgtaatgtggcgcagcgg
ctggcagagcagctcggcgaacagccgggtgccacggtgggattccggatgcgtggcgaa
agctgcgtcgggccagaaacccggctggaagttgttaccgaagggatgctcacgcgcatg
cttcagcacgatccgatgctggagggcgtgtcgctggtgatcctcgatgagtttcacgag
cgcagcctgcaggccgatctggcgctggcgctgctgctcgatgtgcagcagggattacgc
gacgaccttaaaatcatgctgatgtccgccacgctcgacaatgcccggctggcggcgctg
ctgccggatgcgccactgattatttcagaagggcgcagctatccagttgaacggcgttac
gcgtcgctgaatcagaacgtacgctttgaagaggcggtcgcgcgtgaagtcgctcagctg
ctgcgcgatgaagagggttcactgctactgtttctgccgggcgtggcagaaattgaacgg
gtaaagcgtgagctggaatcacgcatcagtgacgatgtggatctgacaccactctatggc
gcactgccgctggcggcgcagcgacgggcgatcctgcccgccgccgccggacgtcgcaaa
gtggtgctcgccactaatatcgccgagaccagcctgaccattgaggggattcgcctggta
gtcgacagtgcgctggagcgcagcgccctgtttgacgctcgcagcggcgtaacgcgtctg
cagacgcagcgcatcagccaggcctcaatgattcagcgcgcaggtcgcgccgggcgactg
atgccgggaatctgtctgcatctgctgccgcaggagcaggcgtcacgtgcagcagcgcag
agcgaaccggaaatcgtgaacagcgatctctcgtcgctgtggctggatctgctgcagtgg
ggctgtaccgggccgcaacagctgcagtggctggatcagccgcccgccagaaatctggac
gcggcacaacggcagctgacccgtctgggtgcgctggacagcaacggcctgcttaacaca
ctgggacggcgtatggcacagctgggttgcgatccgcgacttgctgctatgctctgtgcc
gcgggcgatgagccggatgcggtcgccagcgtcgcgctgctggtggcgattctggaagat
cctccacgcagcggcagtgccgatctgcgtgatgcgctgcatcggcctcaggctcaatgg
cagcggcgggcgcagcagtggcagcagcgactcaaaattcgtggcggacgggtggatgaa
gatcgcctcgctggcctgctggcagtggggtttggcgatcggctggcgcggcgtcgcgat
cagagcggtcgctatcagctggccaacgggctgggggccagactcgatgagcaggatggc
ctgacgcgcaacgaatggctgatagcacccgccctgttgcagggcagtgcgacgccggat
gcccggatgctgctggcactgccggtcgacattgaaacgctgtgccagcagcagcccgca
ctgattgagcgccggactgaagtggaatgggacgaagagaagggcacgctgcgtgcgttc
agacgtgagcagattggcgcgctgatcctgaagacccagccgatggcgcgcccggagccg
gacgttctgcacgccgccatactgcgctggatcgccgaaaaaggtctgtcggtattgggc
tggacgccggatgccgaacagttgcgcctgcgtatccagtgtgcggcgcagtggctgccg
gaagagagctggcccgctatggacgatgaaagcctgtttgcgagcctgtcagagtggctg
ttgccgcagatgtcagcggtacgcgatctgcgcagcctgcaggcggtaaacctgacaacg
gcgctcttacatttactcacatggtcacaacgtcagcggctggatagtgtgctgccaact
cattacactgtgccgaccggaagccggctgccgattcgctacgatgcggataagccgccc
gcgctagcggtcaggattcaggagatgtttggcgaagcgcagaatcccaccgtggcggaa
ggacgtatcccgctggtgctggagctgctatcgcccgcccagcgtccgttgcagatcacc
cgcgatctggcggcgttctggcgcggtgcttggccggaggtcaggaaagagatgaaggga
cgctatccgaaacatctctggccagaggatccggccaccgctttgccaacaaggcgaacc
aaaaaaatgtccccgcagggttga

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Ontology (1)   
   KEGG BRITE (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (13)   

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