KEGG T01326: Pvag

Pantoea vagans: Pvag_0548

Entry

Pvag_0548 CDS T01326

Gene name

sucA

Definition

2-oxoglutarate dehydrogenase E1 component (EC:1.2.4.2)

Orthology

K00164

2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]

Organism

pva Pantoea vagans

Pathway

pva00020	Citrate cycle (TCA cycle)
pva00310	Lysine degradation
pva00380	Tryptophan metabolism
pva01100	Metabolic pathways
pva01110	Biosynthesis of secondary metabolites
pva01120	Microbial metabolism in diverse environments

Module

pva_M00009	Citrate cycle (TCA cycle, Krebs cycle)
pva_M00011	Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:pva00020]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:pva00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:pva00380]

SSDB

Motif

Pfam:

Transket_pyr E1_dh

Other DBs

NCBI-GI:

308186071

NCBI-GeneID:

9789068

UniProt:

E1SH12

Position

571918..574725

AA seq 935 aa
MQNSAMKPWLDSSWLAGANQSYIEQLYEDFLTDPDSVDAVWRSMFQQLPGTGMKPEQFHS
TTREYFRRLAKDASRYTSSVSDPETNSKQVKVLQLINAFRFRGHQHANLDPLGLWKQDRV
ADLDPAFHDLTEADFQESFNVGSFAIGKETMKLADLFDALTQTYCGSIGAEYMHINNTDE
KRWIQQRLESVAGRAAFSNEEKKGFLKELTAAEGLEKYLGAKFPGAKRFSLEGGDALVPM
LREMIRHAGKSGTREVVLGMAHRGRLNVLINVLGKKPQDLFDEFAGKHKEHLGTGDVKYH
MGFSSDVETEGGLVHLALAFNPSHLEIVSPVVMGSVRARLDRLDEPASNKVLPITIHGDA
AVIGQGVVQETLNMSQARGYEVGGTVRIVINNQVGFTTSNPKDARSTPYCTDIGKMVLAP
IFHVNADDPEAVAFVTRLALDYRNTFKRDVFIDLVCYRRHGHNEADEPSATQPLMYQKIK
KHPTPRKIYADRLEGEAVATQEDATEMVNLYRDALDAGECVVPEWRPMSLHSFTWSPYLN
HEWDEPYPAQVDMKRLKELALRISQVPEEVEVQSRVAKIYNDRRLMAEGEKAFDWGGAEN
LAYATLVDEGIPVRLSGEDTGRGTFFHRHAVVHNQANGSTYTPLHHVHSGQGQFKVWDSV
LSEEAVLAFEYGYATAEPRILTIWEAQFGDFANGAQVVIDQFISSGEQKWGRMCGLVMLL
PHGYEGQGPEHSSARLERYLQLCAEQNMQVCVPSTPAQVYHMLRRQALRGMRRPLIVMSP
KSLLRHPLAISTLDELANGSFQPAIGEVDNLDAQGVKRVVLCSGKVYYDLLEQRRKNEQT
DVAIVRIEQLYPFPHHAVQEALQAYSHVQDFVWCQEEPLNQGAWYCSQHHFREVVPFGAT
LRYAGRPASASPAVGYMSVHQQQQQDLVNDALNVN

NT seq 2808 nt +upstreamnt +downstreamnt
atgcagaacagcgcgatgaagccctggctggactcttcctggctggccggcgcgaatcag
tcttacatagagcagctctatgaggatttcctgaccgatcctgactctgtcgatgcagtg
tggcgctcgatgttccaacagttaccgggcaccggaatgaaacctgagcagtttcactcc
accacacgtgagtacttccgtcgcctggcgaaagacgcatctcgttacacctcatctgtc
tccgatccggaaaccaactccaagcaagtgaaagtgctgcagctgatcaacgcgtttcgt
tttcgcggtcatcagcacgccaatctcgatccgcttggcctgtggaaacaggatcgggtc
gccgatcttgatcccgcttttcatgacctgaccgaggccgattttcaggaaagctttaac
gtaggctcttttgctatcggtaaagagaccatgaagctggccgatctcttcgacgcgctg
acgcagacgtactgtggctcaatcggtgcggaatatatgcacatcaacaacacggatgag
aaacgctggatccagcagcgtcttgagtctgtggcgggccgtgcagcgttcagcaacgaa
gagaaaaaaggtttcctgaaagagctgaccgcggcagaaggactggaaaaatatctcggg
gcgaaattcccgggtgccaaacgcttctcgctggaaggcggcgatgcgctggtgcccatg
ctgcgcgaaatgatccgtcacgccggcaagagcggtacccgtgaagtcgtgctgggcatg
gcgcaccgtggtcgtctcaacgtgctgatcaatgtgctgggtaaaaagccacaggatctg
ttcgacgagttcgccggtaagcataaagagcatcttggcaccggtgacgtgaagtaccac
atgggcttctcttctgacgtggaaaccgaaggcggcctggttcacctggcgctggcgttt
aacccgtcacacctggagattgtcagcccggtcgttatgggttccgtgcgtgcccgtctg
gatcgactggatgagcctgcgagcaataaagtcctgccgatcaccattcatggtgacgcg
gcggtgattggccagggcgtggttcaggaaaccctgaacatgtcacaggcacgcggttat
gaagtgggcggtactgttcgcatcgtcatcaacaaccaggttggttttacgacgtccaac
ccgaaagatgcgcgttcaacgccttactgcaccgacatcggcaaaatggtgctggcaccg
attttccacgtcaacgctgatgacccggaagcggtcgcctttgtgacccgtctggcgctc
gactatcgcaacacctttaaacgtgatgtgtttatcgatctggtctgctatcgccgtcat
ggtcacaacgaggccgatgagccaagtgcgacccagccgctgatgtaccagaaaatcaaa
aaacacccgacgccgcgtaaaatttacgccgaccgtctggaaggtgaagccgttgccacg
caggaagatgcgaccgaaatggtcaatctttaccgtgatgcgctggatgcgggcgaatgc
gtggtgccggaatggcgtccgatgagcctgcactcctttacctggtcaccttacctgaac
catgagtgggatgagccttatccggctcaggtcgacatgaaacgtctgaaggagctggcg
ctgcgtatcagccaggtacctgaagaggttgaggtgcagtcgcgtgttgccaagatttat
aacgaccgtcgtctgatggctgaaggcgagaaagcctttgactggggcggcgcggaaaac
ctggcctacgccacgctggttgatgaaggcattccggttcgcctgtcgggtgaagatacc
ggtcgcggcaccttcttccatcgtcacgcggtggttcataaccaggcaaacggctcaacc
tacacccctctgcaccatgtgcacagcggccagggccagttcaaagtctgggactccgtg
ctatcagaagaggcggtactggcctttgaatatggctatgccactgctgagccacgcatc
ctgaccatctgggaagcgcagtttggtgacttcgccaacggtgcacaggtcgttatcgac
cagttcatcagctccggtgagcagaaatggggccgtatgtgtggcctggtcatgctgctg
ccgcacggctatgaaggtcaggggccagagcactcctctgcgcgtctggagcgttatctg
caactctgcgctgagcagaacatgcaggtctgcgtaccgtcaacgcctgcgcaggtttac
catatgctgcgtcgtcaggcgctgcgcggtatgcgccgtccgctgattgtgatgtcgccg
aaatcgctgctgcgtcatccgctggcgatctccacgctggatgaactggctaacggcagc
ttccagccggcgattggcgaagttgataatctggatgcgcagggtgtgaaacgcgtcgtg
ctgtgctccggtaaagtctattacgacctgcttgagcagcgtcgtaaaaatgagcagacc
gatgtggcgattgtccgtatcgagcagctctatccgttcccgcatcatgcggttcaggaa
gcattacaagcgtattctcacgtacaggattttgtctggtgtcaggaagagccgctgaat
cagggcgcctggtactgcagccagcatcatttccgtgaagttgtgccgtttggtgcgacc
ttacgttatgcaggccgcccggcctccgcctcaccggccgtgggttacatgtccgtacac
caacaacagcagcaagacctggttaatgacgcgctgaacgttaattaa

All links

Pathway (8)   
   KEGG PATHWAY (6)   
   KEGG MODULE (2)   
Chemical substance (13)   
   KEGG COMPOUND (13)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (35)   

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