KEGG   Pantoea vagans C9-1: Pvag_1481
Entry
Pvag_1481         CDS       T01326                                 
Symbol
yciR
Name
(GenBank) Uncharacterized protein yciR
  KO
K14051  c-di-GMP phosphodiesterase Gmr [EC:3.1.4.52]
Organism
pva  Pantoea vagans C9-1
Pathway
pva02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:pva00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Pvag_1481 (yciR)
Enzymes [BR:pva01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.52  cyclic-guanylate-specific phosphodiesterase
     Pvag_1481 (yciR)
SSDB
Motif
Pfam: EAL GGDEF PAS_9 PAS PAS_4 PAS_10 GGDEF_2
Other DBs
NCBI-ProteinID: ADO09671
UniProt: E1SEN9
Position
1562880..1564865
AA seq 661 aa
MTDEHGQTLLYTLFGTTSPHWRLTADSDALHFAEDESSQTNIALPLTPGQAAMIRAMPVI
TSSINLTMTLQGIDVPMHFVGRKVNQASWAGTASAWGDTSAVARDLTLGLSFAEQVVSEA
NSVIVILDQRGNIQRFNRLSEEYTGLNEHEVIGRNVFQLFMTKQEASQSRRNIAGFFRDG
NSYEVERWVKTKKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRVLANTD
TVTGLPNRNAIHQQISLALERSEGDETGVVYLDLDNFKKVNDAYGHMFGDQLLQAVSLAI
LSCLGKDQTLGRLGGDEFVVLAEHTSQAALEAMSSRILERLRQPFRIGLIEVYSGCSIGI
AFAPLHGDDRESLIRNADTAMYHAKENGRGKFCVFAAEMNQRVFEYLWLDTNLRKALELD
HLLVHYQPKIDSDGQVRSAEALVRWNSPERGLVSPADFIPYAEESGLIVPLGRWVMLNVL
KQIIAWREQGIFLRVAVNVSARQLIDQSIYTDLKQALHEANITDCPIDIELTESCLIENE
TEALKLMKQFQELGAQVHLDDFGTGYSSLSQLARVPINAIKLDQSFIRDINKQPVSQSLV
RAIVAVAKALDLQVIAEGIETPDEEKFVLKSGVDGRQGYYYAKPMPAEQFGHWLAKHPAR
V
NT seq 1986 nt   +upstreamnt  +downstreamnt
atgaccgatgaacacgggcaaacgttgttgtacactctttttggtacaaccagccctcat
tggcgtctgaccgcggacagcgatgcgttgcattttgccgaagatgagtcatcacaaacc
aatatcgccctgccgctgacccccggccaggccgcaatgatccgcgcgatgccggtcatc
acctcaagcatcaatctgactatgacccttcagggcattgatgtgccgatgcattttgtc
ggacgtaaagtgaatcaggcttcatgggccggcaccgcctctgcctggggcgatacgtct
gcagttgcccgcgatttaaccctggggctgtcgttcgctgaacaggtggtttctgaagct
aattcggtgattgtaatcctcgatcagcgcggcaatattcagcgttttaaccgcctgagt
gaagaatataccggcctgaatgagcacgaggttattggccgtaacgtctttcagcttttt
atgaccaaacaggaagcctcacagtcacgacgcaacattgcgggcttcttccgtgacggt
aactcttatgaggttgagcgctgggtcaaaaccaaaaaaggtcagcgactgtttcttttt
cgtaataagtttgttcacagcggcagtggcaaaaatgaaattttcctcatctgttctggc
acagacatcaccgaggagcgacgcgcccaggaacgcctgcgggtgctggcaaacaccgac
acggtgaccggtttacccaatcgcaacgccattcatcaacagattagcctggcgctggag
cgatccgagggggatgagaccggcgtggtttatctcgacctcgataattttaaaaaagtg
aacgacgcctacggtcatatgttcggcgatcagttactgcaggcagtttcactggccatc
ctcagctgtctgggtaaagaccagaccctgggccgtctgggtggcgacgaatttgtggtg
ctggctgagcacaccagtcaggctgcactggaagcgatgtcttcccgcattcttgagcgg
ctgcgtcagcctttccgtatcgggctaatcgaagtttacagcggctgttcaattggcatc
gcttttgcgccgctgcatggcgacgaccgcgagagcctgattcgcaacgcagacaccgcg
atgtatcacgccaaagagaacgggcgcggcaagttctgcgtgtttgcggcagagatgaac
cagcgggtctttgagtatctgtggctggatactaacctgcgcaaggcgctggaactggat
catctgctggtgcactatcagccaaaaatcgacagcgatggccaggtccgcagcgctgaa
gcactggtgcgctggaactcaccagagcgtggtctggtctcgcccgctgactttattccc
tatgctgaagagtcagggctgattgtgccgctgggacgctgggtcatgctcaacgtgctg
aagcagattatcgcctggcgtgagcagggcatttttctgcgcgtcgccgtcaacgtttcg
gcccgtcagctgattgatcagagcatctacactgacctgaaacaggcgctgcacgaggct
aatatcaccgactgccccatcgatattgagctgaccgaaagctgcctgattgagaatgaa
actgaagcgctgaagctgatgaagcagtttcaggaactgggcgcacaggtgcacctggat
gactttggcaccggttactcctcgctttctcaactggcacgcgtgccaatcaatgccatc
aaactcgaccagagctttatccgcgatattaacaagcagccggtttcacaatcgctggtg
cgcgctatcgtcgccgtcgccaaggcgctcgatttgcaggtcattgctgagggtattgag
accccggatgaagagaagtttgtcctcaaaagtggtgtcgatgggcgtcagggttactat
tacgcaaaaccaatgcccgcggaacaatttgggcattggctggctaagcatcctgcccgc
gtttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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