KEGG T00499: Cvib

Chlorobium phaeovibrioides: Cvib_0510

Entry

Cvib_0510 CDS T00499

Definition

single-stranded-DNA-specific exonuclease RecJ

Orthology

K07462

single-stranded-DNA-specific exonuclease [EC:3.1.-.-]

Organism

pvi Chlorobium phaeovibrioides

Pathway

pvi03410	Base excision repair
pvi03430	Mismatch repair
pvi03440	Homologous recombination

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:pvi03410]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:pvi03430]
Genetic Information Processing; Replication and repair; Homologous recombination [PATH:pvi03440]

SSDB

Motif

Pfam:

DHH DHHA1 HATPase_c_2

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

595863..597587

AA seq 574 aa
MKRYRWNLPPVDDAALTSFACSIKASLPLARIFFMRGVKSYDAAEAFFTASLETLPSPSL
FASMPKAVGRVQEAIRSGEKIMIYGDYDVDGITGTAMLNLFLRDRDADVSYYINNRFEEG
YGLSMEGIRAAAERQVGLIITVDCGISANLAIERAGELGMDVIVCDHHEPEELPDAYAIL
NPKVPGCSYPFRELCGCGVAFRFVQAIAEELQLSAESWQQYLDLVAIATAADMVVLSEEN
RTMVREGFRMMQQRPRVGIEAMLSFMKVNPRDLGMTGVTFGIAPRINAAGRMGSARKAVD
WLLAESKDEAHKHTGELEELNILRRRTDLEMLKRAEEMVEGHFASYCSSIVLYDESWHLG
VVGIVASKMLERYHLPTVILGASKELVKGSVRSVPGLNIYSVLQECSDLLEQFGGHHQAA
GVSMRPENLPAFRKRFDEISARVLDMDARQKELTVDTELGLGEITGNFMKALQRFSPYGV
GNPEPLFLTEGLQCTGSVRLLKERHVKFMVRDASGKRLDVIAFDRKDIYDALMESSGQSF
SMVYSLELHEWNGRVEPQAKVKDLSVESLHRQGL

NT seq 1725 nt +upstreamnt +downstreamnt
atgaaacgctaccgctggaaccttcctcccgttgatgacgccgcgctcacatcttttgcc
tgcagcatcaaagcctcccttccgcttgcccggatatttttcatgagaggggtgaagagt
tatgatgctgctgaagcctttttcactgcatctctggagactcttccttcaccttcgctc
tttgcttccatgccaaaagcggttggccgtgtgcaggaggcaatccgctctggtgaaaaa
atcatgatatacggcgactatgatgtggacggcattaccggaacggcgatgctgaatctt
tttttaagggatcgggatgcggatgtttcctattacatcaacaaccggtttgaagaggga
tatgggttgtcaatggagggtatcagagcggcagccgaacggcaggttgggctcatcata
acagtggattgtggcatcagtgccaatctggcgatagaacgggccggggagctggggatg
gatgtcattgtctgtgaccatcatgaaccggaagaactgcctgatgcctatgccattctg
aaccctaaagttccggggtgcagctatccgttcagggaactctgcgggtgcggcgtggcc
ttcagattcgttcaggccattgctgaagagcttcaactcagtgcagagagctggcagcag
tatcttgatcttgttgccattgccaccgctgccgacatggtggttctttcggaagagaac
cggacgatggtgcgggaaggtttcagaatgatgcagcaacggccacgggtgggcattgag
gccatgctgtcatttatgaaggtgaacccccgggatttgggcatgaccggtgtcacattt
ggtattgccccccgcatcaatgccgcaggtcggatgggatctgcccgcaaggcggttgac
tggctgcttgccgagtcaaaagatgaggcccataagcataccggagagcttgaagagctg
aacattcttcggcgccgtacggacctggagatgctgaaacgggcggaggagatggttgaa
gggcattttgcatcatactgctcatccattgttctgtatgacgagagctggcatcttgga
gtggttggcatcgtagcttcaaaaatgcttgaacggtaccatcttccgactgttattctt
ggggcttcgaaggagctggtgaaggggtcggtcagaagtgtacccgggctgaacatctac
agtgttctgcaggagtgttcagatcttcttgagcagttcgggggtcatcatcaggctgcg
ggggtgtcgatgcgtccggagaatcttccggccttcagaaagcggtttgatgagatttca
gcgagagtccttgatatggatgcccggcagaaggagcttactgtcgatacggagcttggt
ctgggtgagattaccggcaacttcatgaaagcacttcagcgattttccccgtatggagtg
ggaaaccccgagccgttgtttcttacagaaggattgcagtgcactggttctgtaaggctg
ctgaaggagcgtcatgtgaagttcatggtgagggatgcgtccggaaagcgacttgatgtc
attgcctttgaccggaaagatatttacgacgcattgatggagtcatccggtcagtcgttt
tcaatggtctactctcttgaactgcatgagtggaatggtcgggtagagccacaggcaaaa
gtcaaggatctttccgttgagagtctgcaccgtcagggtctgtga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-PVI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

Download RDF

DBGET integrated database retrieval system