KEGG   Paenibacillus vortex: PVOR_31409
Entry
PVOR_31409        CDS       T05385                                 
Name
(GenBank) ATP-dependent DNA helicase PcrA
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
pvo  Paenibacillus vortex
Pathway
pvo03420  Nucleotide excision repair
pvo03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pvo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    PVOR_31409
   03430 Mismatch repair
    PVOR_31409
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pvo03400]
    PVOR_31409
Enzymes [BR:pvo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PVOR_31409
DNA repair and recombination proteins [BR:pvo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     PVOR_31409
   MMR (mismatch excision repair)
    Other MMR factors
     PVOR_31409
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PcrA_UvrD_tudor UvrD_C_2 Viral_helicase1 AAA_11 AAA_30 Glyco_hydro_64 ResIII
Other DBs
NCBI-ProteinID: EFU38110
UniProt: A0A2R9SL71
Position
complement(9125..11455)
AA seq 776 aa
MQPIDIHEAVKRLNPEQRKAVEATDGPLLIMAGAGSGKTRVLTHRIGYLIATRKAAPWSI
LAITFTNKAAREMQERVSKLVGREGQDIWVSTFHSMCVRILRKDIERIGFTSNFSILDST
DQLSVIRNVMKHHNIDPKKFEPKAVQAAMSAAKNELISPQQYEQKAGDYFESLVAKVYTE
YQKRLKSNNSLDFDDLIMTTIQLFKEVPEVLDFYQRKFQYIHVDEYQDTNRAQYMLCRML
ADSHHRICVVGDSDQSIYRWRGADITNILNFEQDYPEARTILLEQNYRSTANILNAANNV
IGLNTGRKPKNLWTEQGEGPKIKVFRGDTEHDEGYFVTSEISKNINAGKNYQDHAILYRT
NAQSRVIEEILIKSDIPYQIVGGIKFYDRKEIKDMLAYLRLISNPDDDISLTRIINVPKR
SIGDTTVAKLAAAAGERGISIFRVLEIVDDLGFAGRTRNALVGFYDMIAALSRMVEFLSV
TELTEKILEMSEYRLELQNENTIESRSRLENIDEFLSVTQEFEKNNEDKSLISFLTDLAL
IADIDSMNDDEEDRDDAVVLMTMHSAKGLEFPVVFIIGMEEGVFPHSRAFMDNEELEEER
RLAYVGITRAEKQLFLSCARMRTLFGRTTANPPSRFLEEIPEELKEDTQMAHDRYRRGGS
GSVGGSYAGRGFGGGGGSNFGGGRSVDLSLSGSTASAQAAPKSRVTMTTGAASRPASASG
SGEFKAGDKVAHGKWGTGTIVAVKGSGNDMELQIAFPAPVGVKRLLAGFAPITKVE
NT seq 2331 nt   +upstreamnt  +downstreamnt
atgcagcccattgacatacacgaggcggtcaagcgtctcaatcccgagcagcggaaggcc
gttgaagctacggacggacctctgctcattatggcaggagccggctcaggcaagacgagg
gtgctgacgcaccggattggttacctgatcgccacccgtaaagccgcaccatggagcatt
cttgcgattacctttacgaataaagcagcccgcgagatgcaggagcgggtatccaagctg
gtcggccgcgaaggccaggatatctgggtatcgacattccactcgatgtgcgtgcgcatt
ctgcgcaaagacatcgagcggattggttttacctccaatttcagcattctggattcaacg
gaccaattatcggtcattcggaacgtgatgaagcatcataacatcgatccgaagaaattc
gagccgaaggcggttcaagcggccatgagcgcggccaagaatgagctgatctccccgcag
cagtatgaacagaaagccggggactattttgaatcccttgtagccaaggtgtacaccgaa
taccagaagcgcttgaagagcaacaactcgcttgatttcgacgatctgatcatgaccacg
atccagctgtttaaggaagtgccggaggtcctcgacttctaccagcgcaaattccagtac
attcatgtagatgaatatcaggataccaaccgggcgcagtacatgctctgccgtatgctg
gcggacagccatcaccgcatatgcgtggtcggggacagcgatcagtccatctaccgctgg
cgcggtgcggacatcacgaacatcctgaattttgaacaggattatcccgaggcgcggacg
attctgctggagcagaattaccgttctacagcgaacattttgaacgctgccaacaatgtg
attggcctgaacacgggccgcaagccgaagaatctgtggaccgagcaaggtgaaggaccg
aagatcaaggtgttccggggggatacggagcatgatgagggatattttgttacctcggaa
atcagcaagaacatcaatgcaggcaagaactatcaggatcatgcgatcctgtaccggacc
aatgcgcagtcccgggttatcgaggaaattctgatcaagtcggacattccgtaccagatc
gtcgggggtatcaagttctatgatcgcaaagagatcaaggacatgctcgcctacctgcgc
ctgatttcgaatccggatgacgatatcagtttgacgcggatcatcaacgtgcccaaacga
agcatcggtgacaccaccgtcgcgaagctggctgcagcagccggagagcggggcatctcg
atcttccgcgtgctggaaatcgtggacgacctcggttttgccggacggacgcgcaatgcg
ctggtgggcttttacgacatgattgccgccctcagtcgaatggtcgagtttctctcggtc
accgagcttacggaaaaaatactggagatgtccgaataccggctcgagctgcaaaatgag
aatacgatcgaatccagatcccgccttgagaacattgacgagttcctgtcggttacgcaa
gagtttgagaagaataatgaggataagtccctcatctccttccttacggatcttgcgctg
atcgcggacatcgattcgatgaacgatgacgaagaagaccgtgacgacgctgtcgtgctc
atgaccatgcatagcgccaaaggtctggagttcccggtggtgttcattatcggcatggaa
gaaggggtattcccgcacagccgtgccttcatggataacgaagagctggaagaggagcgc
cgccttgcttatgtcggcattacgcgtgccgagaaacagctgttcctgtcctgtgcgcgt
atgcgtacactctttggccgcacgacggcgaacccgccttcacgcttcctggaggaaatc
ccggaggagctgaaggaggacacgcagatggcgcatgaccgctaccgccgcggtggaagc
ggaagtgtaggcggatcttatgcaggacgtggcttcggcggaggcggaggcagcaacttt
ggcggtggacgcagcgtggacctctccctaagtggatcgacggcttcggctcaagccgca
ccgaagagccgggtgaccatgacaaccggtgccgcatcccgaccagcgtctgcttcgggc
agcggggaatttaaagctggcgacaaagtagcccatggcaaatggggtaccggcaccatt
gtggcggtgaagggaagcggcaatgacatggagctgcagattgcttttccagcaccggtt
ggcgtaaaacgtcttcttgccggtttcgcgccgattacaaaggtggaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (21)   

Download RDF
DBGET integrated database retrieval system