KEGG   Pseudomonas veronii: PverR02_30745
Entry
PverR02_30745     CDS       T04853                                 
Name
(GenBank) type VI secretion protein IcmF
  KO
K11891  type VI secretion system protein ImpL
Organism
pvr  Pseudomonas veronii
Pathway
pvr02025  Biofilm formation - Pseudomonas aeruginosa
pvr03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pvr00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PverR02_30745
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    PverR02_30745
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pvr02044]
    PverR02_30745
Secretion system [BR:pvr02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PverR02_30745
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical
Other DBs
NCBI-ProteinID: AQY69245
Position
complement(6695143..6698643)
AA seq 1166 aa
MKAFFSFMIRWVIPLLGLIALSLIIWFVGPLLDVLVPEGRRWALIVLLFAAWLAYRVFRI
LQARRQAAEVMRSLAAQTPADPNSVATAEELTSLRQRMDEALALLKKAKLGGDERRNLYE
LPWYVIIGPPGSGKTTALVNSGLHFPLAAQLGAGAVRGVGGTRNCDWWFTDQAVLLDTAG
RYTTQDSNSPVDKAAWLGFLDLLKKQRSRRPIDGAFIAISLSDLLLGSEAERAAHAAAIR
LRIQELYTQLGVRFPIYLMLTKLDLVPGFMEFFDNLSKEERAQVWGMTFALDDGKHSDSP
LAHLQSEFAGLEQRLNERLVERLQQERDPARRDLIYGFPQQFGALKDCLQSFLEGVFKPN
AFEERVLLRGVYFTSGTQEGSPIDRLIGTMAQSMNLDRQHLARQSGSGRSYFIEKLFSAV
AFAERGLVGVNPQVERRRKWIARGVLAATVALVIVVSSLWWVSYRANQAYIAQVDQKVAP
LGQAVQNLSPAQREVLAVLPLLNAVKHLAGDSPSWSEGLGLYQGDMLEAESASVYRKLLI
AVFAPRLVTRIEEQLHGGGNSDFLYEGLKAYLMLADTEHYDADFIKAWIALDWDRNLPRD
LPTDQRQALAEHLQALFERHPPSARLDARLIDDLRRQLQQLPVAQRVYDRVKRQKLPDGI
PDFRLNEAAGRDAALVFSRKSGKPLGEPLSGFFTAKGYRQAFLLSSLNQTGTLAEEQWVL
GHEQADQQNVVSLAADVRRLYFQDYQRQWDALLADIDFVPITSVAQAADVLRVISGPTSP
LKKLLVAVARETDLQAEERQLAAKGVPVEGGVDKLKERLGNLLGQAQPNADAPAAADDPV
TAHFAELNSIVSKNEGEPAAIDGLLADMNALYVQVSAMVGASGDALLGEAKNQAAAAATR
VSLNAERQPPLVQGMVKSVVNSTTNSMMGGVRNQLNAAWVSEVVNVYRQSLAGRYPMSPG
SARDATLDDFGQFFGVGGVMDNYFRKYLQSYVDTSAQTWRWQPGAAQKLGIAPGVLQTFQ
RAATIRDAFFRAGGTQPIVRFELKPVAMDASITQFLLDLDGQQLSYDHGPSRPVAMQWPN
PGSIGVVRISIMPSSASGRSGVTLDGPWAWFRLLEQSDLTAGNSPDRFNLRLRVDGASIA
YELRANSAFNPFKSRVLSGFSLPERL
NT seq 3501 nt   +upstreamnt  +downstreamnt
gtgaaggcgtttttcagtttcatgattcgctgggtgatcccgttgctgggcctgatcgcc
ctgagcctgatcatctggtttgtcgggcccctgctcgacgtgctggtgcccgaagggcgg
cgctgggcgctgatcgtcctgctgtttgcggcctggctcgcctaccgtgtgttccgcatc
ctccaggcccgtcgtcaggccgccgaagtgatgcgcagcctggccgcgcaaaccccggcc
gaccccaacagcgtcgccaccgccgaagaactcaccagcctgcgccagcgcatggacgaa
gccctggccctgctgaaaaaagccaagctcggcggggatgagcggcgcaacctctacgag
ctgccgtggtacgtgatcatcggcccgccgggttcgggcaagaccaccgcgctggtcaat
tccgggctgcatttcccgctggcggcccaattgggcgccggggcggtgcgcggcgtcggc
ggcacgcgcaactgcgactggtggtttaccgaccaggccgtattgctcgataccgccggc
cgctacaccacccaggacagcaactccccggtggacaaagccgcctggctgggcttcctc
gacctgttgaaaaagcagcgctcgcgccgcccgatcgatggcgcctttatcgccatcagc
ctgtcggacctgctgctgggcagcgaagccgaacgcgctgcccacgcggcggcgattcgc
ctgcgtatccaggagctgtacacccagctgggcgtgcgtttcccgatctacctgatgttg
accaagctcgacctggtgccgggtttcatggagttcttcgacaacctgagcaaggaagaa
cgcgcccaggtgtggggcatgacctttgccctggacgacggcaagcacagcgacagcccc
ctggcgcacctgcaaagcgaattcgccggcctcgaacagcgcctcaacgaacgcctggtc
gaacgcctgcaacaggaacgcgacccggcgcggcgcgacctgatctacggcttcccgcag
cagttcggtgcattgaaagattgcctgcaaagcttcctcgaaggcgtgttcaaacccaac
gcctttgaagagcgcgtcttgctgcgcggcgtgtatttcaccagcggcacccaggaaggc
agcccgatcgatcgcttgatcggcaccatggcccagagcatgaacctggaccgccagcac
ctggcacgccagagcggcagcgggcgcagttacttcatcgagaaactgttcagcgcggtc
gcctttgccgagcgcgggctggtgggcgtcaacccgcaggtcgagcggcggcgcaaatgg
atcgcacgcggcgtgctcgcggccaccgtagcgctggtgatcgtggtcagcagcctgtgg
tgggtcagttatcgcgccaaccaggcgtatatcgcccaggtcgaccagaaggtcgcgccc
ctgggccaggccgtacagaacctcagcccggcacagcgcgaagtgctcgccgtgttgccg
ttgctcaacgcggtgaaacacctcgccggggattcgccaagttggtccgagggcctgggc
ctgtatcagggcgatatgctcgaagccgaatccgccagcgtctaccgcaagctgttaatc
gccgtcttcgcgccgcgcctggtgacgcgcatcgaggagcaactgcacggcggcggtaac
tccgacttcctctacgaaggcctcaaggcttacctgatgctcgccgacaccgagcattac
gacgcggacttcatcaaggcctggatcgccctcgactgggaccgcaacctgccacgcgac
ctacccaccgatcagcgccaggcgctggccgaacacttgcaggcgttgttcgaacgtcac
ccgccgagcgcacgcctcgatgcgcgcttgatcgacgacctgcgtcggcagttgcaacaa
ctgccggtggcccagcgcgtgtatgaccgggtcaaacgccagaaactgcccgacggcatt
ccagacttccgcctcaacgaagccgccggccgcgacgccgcattggtgttcagccgcaaa
agcggcaagccgttgggcgagccgctgagtggtttcttcaccgccaagggctatcgccag
gcgttcctgctgagcagcctgaaccagacaggcaccctggccgaagagcaatgggtgctc
ggccatgagcaggccgaccagcagaacgtggtcagcctggccgccgacgtgcgccgcctg
tacttccaggactaccagcgtcagtgggatgcgttgctcgccgacatcgactttgtgccg
atcaccagcgtggcccaggcggcggacgtgttgcgggtgatttccgggccgacctcgccg
ctgaaaaaactgctggtggcggtggccagggaaaccgacttgcaggcagaggaacgccag
ttggcggccaagggcgtgccggtcgaaggcggcgtggacaagctcaaggaacgcctgggc
aacctgctcggccaggcgcaaccgaacgcggatgcgccggctgctgcggacgacccggtg
accgcgcacttcgccgagctcaacagcatcgtcagcaagaacgaaggcgagccggcggcc
atcgacggcctgctggcggatatgaacgcgctgtacgtgcaagtcagcgccatggtcggc
gccagcggcgatgccttgctcggtgaggccaagaaccaggcggcagcggcggccacgcgg
gtcagcctgaacgccgagcgccagccgccgctggtgcagggcatggtcaagtcggtggtc
aactcgaccaccaacagcatgatgggcggggtgcgcaaccagctgaacgcggcgtgggtc
agcgaagtggtgaacgtgtatcgccagtccctggccgggcgttatccgatgtcgccgggc
agcgcccgtgacgccactctggatgacttcggccagttcttcggcgtgggcggggtgatg
gataactacttccgcaaatacctgcagtcctacgtcgatacctccgcacagacctggcgc
tggcagccgggcgcggcgcagaaactcgggattgcaccgggcgtgctgcaaaccttccag
cgcgcggcgacgatccgcgatgcgttcttccgcgcaggcggcacccaaccgatcgtgcgc
ttcgagctcaagccggtggcgatggacgccagcatcacccagttcctgcttgacctcgat
ggccagcaactgagctacgaccacggcccgagccgtccggtggcgatgcaatggccgaac
cccggcagcattggcgtggtgcgtatttccatcatgccgtcgtcggccagtggccgctcc
ggtgtaaccctggatggcccgtgggcctggttccgcctgttggagcaatcggacctcacc
gccggtaattcgccggatcgtttcaacctgcgcctgcgcgtggatggcgcgagcatcgct
tacgaattgcgcgccaacagcgctttcaacccgttcaagagccgcgtgctcagtggcttc
agcctgccggagcggttatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

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