KEGG T05250: A1sIA79

Candidatus Planktophila versatilis: A1sIA79_04210

Entry

A1sIA79_04210     CDS       T05250

Name

(GenBank) endonuclease VIII

K14441

ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]

Organism

pvs Candidatus Planktophila versatilis

Brite

KEGG Orthology (KO) [BR:pvs00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pvs03009]
    A1sIA79_04210
Enzymes [BR:pvs01000]
2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.4  [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
     A1sIA79_04210
Ribosome biogenesis [BR:pvs03009]
Prokaryotic type
  ribosomal protein modification factors
   A1sIA79_04210

SSDB

Motif

Pfam:

UPF0004 Radical_SAM TRAM_2 DUF3079

Other DBs

NCBI-ProteinID:

ASY17422

Position

complement(827571..828953)

AA seq 460 aa
MSRTVAIVTMGCARNDVDSEELAGRLAADGWTLVADVESAEVAVVNTCGFIESAKKDSID
ALYAANSLKGHGTTKVVVAVGCMAERYGKELAEALPEADAILGFDDYQDISERLQSIISG
NAHTPHVPRDRRALLPIAPVERAAARDESFASSVGAGGSLFRKRLGDAPWAPLKIASGCD
RRCSFCAIPYFRGSFISRRPTEILQEATWLANNGVSELFLVSENTTSYGKDLGDIKLMEK
ILHEFAEIPRVERVRLSYLQPAEMRPSLLQAMIETEKVAPYFDLSFQHTSPTVLRRMRRF
GDSEKFLHLITQIRALSPEAGIRSNFIVGFPGETEADYNDLAEFITEAKLDAVGVFGYSD
EDNTEAIDLLDKVADEVIRQRVESLSSLADEMVSVRAQARIGEHVRVLIEDAELQEGRAA
HQGPEVDGTTSFIGTSFAVGEYVDAVIIESMGADLVAQAQ

NT seq 1383 nt +upstreamnt +downstreamnt
atgtctcgcaccgtagctattgtcactatggggtgcgcccgtaacgatgttgactcagaa
gaactcgctggcagattagccgccgatggctggaccctggtcgcagacgttgaatctgca
gaggtcgcagttgttaatacctgcggttttattgaatcagcgaagaaggattcaatcgat
gccctctatgccgcgaactcacttaaaggtcatggcaccacaaaggtagttgtagccgtg
ggttgcatggcagaacgctatggaaaagagctggccgaggcgcttccggaggcagatgca
attctaggtttcgatgattatcaagatatctcagaacgcttgcaatcaattattagcggt
aatgcacatacgccacacgttccacgcgatcgtcgcgcactacttcccatcgcaccagtt
gaacgcgcagctgcgcgtgatgaaagttttgcatcgtcagtcggcgctggtggttccctc
tttcgtaagcggctaggagatgcaccctgggcgccactaaagattgcttcaggctgcgat
cgtcgttgctccttctgtgcaattccatatttcagaggctcatttatctcacgtaggccg
actgagattctgcaagaagccacatggcttgccaataatggcgtgagtgaactctttctg
gtcagtgagaacaccacgagttatggcaaggacctcggtgatatcaagttgatggagaag
atccttcatgaatttgccgaaatccctagagttgagcgagttcgtctttcttacctgcag
cctgccgaaatgcgaccatcactgctgcaagcgatgattgagaccgaaaaagttgcgccg
tattttgatctctctttccaacataccagccctacagtgttacgtcggatgcgccgtttt
ggtgattcagaaaaattcctacacctgatcacgcaaatccgcgcactctcacccgaggcc
ggaatcagatcaaatttcatcgttggttttcccggtgagaccgaagccgattacaacgat
ttagctgaatttataacggaagcaaagctagatgcagtgggagtattcggatattccgat
gaggataatacggaggcgatagatcttttggataaggtcgccgatgaagtaattcgccaa
agagtagagtcactgtcttcactagctgatgaaatggtctcagtgcgcgcacaagctcgc
atcggtgaacatgtgcgggttctcattgaagatgccgaactacaagaaggacgcgcggct
catcaagggcctgaagtagatggcacaacatcatttattggcacctcatttgctgtcggt
gagtatgtcgatgcggtgattattgaatcgatgggcgcagatttggtggcgcaggcacaa
tga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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