KEGG   Phaseolus vulgaris (common bean): PHAVU_001G001600g
Entry
PHAVU_001G001600g CDS       T03093                                 
Name
(RefSeq) hypothetical protein
  KO
K07583  tRNA pseudouridine synthase 10 [EC:5.4.99.25]
Organism
pvu  Phaseolus vulgaris (common bean)
Brite
KEGG Orthology (KO) [BR:pvu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pvu03016]
    PHAVU_001G001600g
Enzymes [BR:pvu01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     PHAVU_001G001600g
Transfer RNA biogenesis [BR:pvu03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    PHAVU_001G001600g
SSDB
Motif
Pfam: Pus10_C Pus10_N_euk
Other DBs
NCBI-GeneID: 18639925
NCBI-ProteinID: XP_007160608
UniProt: V7CQW3
Position
1:238905..243381
AA seq 503 aa
MEEQKQEETVKRLSGEEEEHKLESESESVQALPSDAVKELLSEGVCARCIFRLFGLHGRV
YASPPSLSSLSPTTHQLCTLCFGILQFTCYSDDTQTLLQNHNLPLLIADTVKRHAYQFNT
FSLEVSIPPIILHNDNSLRSYMKTKFGSQPWFQENLHTGCISTKDALKFSLIYPLENLLE
CKSSMGDFRIRLTYTHPKASKGDQKGSDSAQTCKRRKIGESNIDGERPFSNSLENDFSDC
GEFLLEKPNEPCHFAFFCYRTPLYFGGRYLKYSRNVSQTCWIIDDERMGEASVEEIIGGN
ILQSCQGDSFKFHAAGREDIDVRMLGPGRPFLVEVQNARHIPSELFVKDVEKKINNMEKK
LVRVKNLKLVGSDGWDLMREGEAEKQKQYAALVWISRPLKDEDFQCISSHKDLKLLQRTP
IRVLHRRSPLDREKIIHWMKIEAIAGSSQYFLLHLCTQAGTYIKEFVHGDLGRTHPSIGS
ILGCRAEILQLDVTDIKMECFLT
NT seq 1512 nt   +upstreamnt  +downstreamnt
atggaggagcagaagcaggaggaaaccgtaaagcgtttgagtggtgaagaagaagaacac
aaattggaatcggaatcggaatcggtgcaggctttgccctccgacgctgtgaaggagttg
ttgtcggaaggggtatgtgcgcgttgcatctttcgcctcttcggcctccatggccgcgtc
tatgcttctcctccttccctctcttctctctcccccaccacacatcaactttgcacactt
tgcttcgggattctgcagttcacgtgttattcagacgacacccaaacgctccttcaaaat
cacaacctcccacttctcattgctgacacggttaaacgacacgcctatcagttcaatacc
ttctcccttgaagtttccatcccaccaatcattctccacaatgataactctcttcgctca
tatatgaaaaccaaattcgggtcccaaccttggttccaggaaaacttgcatactggatgc
atatctacaaaggatgccttaaagttttctctaatatatcctcttgaaaatcttctggaa
tgtaaatcgagtatgggcgatttccgcattcgtttgacttacactcaccctaaagcatca
aagggggatcagaaagggtcagatagtgcccagacttgcaagagaagaaaaataggtgag
tccaatattgatggagaaagaccttttagcaattcacttgaaaatgatttctctgactgc
ggtgaattcctgctagaaaagccaaatgagccttgccattttgctttcttttgctacagg
acgcctttatattttggtggaagatatctgaagtattcacggaatgtgagtcaaacatgc
tggatcattgatgatgaaagaatgggagaagcatcggttgaggaaataattggtggaaac
atcctccaatcctgccaaggtgatagttttaagtttcatgctgcaggcagagaagatatc
gatgtccgaatgttgggtccaggcaggccctttcttgttgaagtgcaaaatgcacgacat
atcccatctgaactgttcgtaaaagatgtagagaaaaagataaataacatggagaagaaa
ttggttagggtgaaaaatctgaaacttgtgggtagtgatggctgggaccttatgcgtgaa
ggtgaagcagagaagcagaaacaatatgctgctttagtgtggatttctcgtcctctaaag
gatgaagattttcaatgtatttcttcacacaaggatttgaaacttttgcagaggacccca
ataagggtgctacatcgtcgcagtcctttagaccgggaaaagattattcattggatgaaa
atagaggcaattgctggaagttcccaatattttcttttgcacctatgtactcaggctggg
acctatatcaaggaatttgttcatggggatcttggacgcacccatcctagcattggatca
attttgggatgcagggctgaaattttgcaacttgatgtcacagacatcaaaatggaatgt
ttcctgacataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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