KEGG   Phaseolus vulgaris (common bean): PHAVU_006G060500g
Entry
PHAVU_006G060500g CDS       T03093                                 
Name
(RefSeq) hypothetical protein
  KO
K12616  enhancer of mRNA-decapping protein 4
Organism
pvu  Phaseolus vulgaris (common bean)
Pathway
pvu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pvu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PHAVU_006G060500g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pvu03019]
    PHAVU_006G060500g
Messenger RNA biogenesis [BR:pvu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     PHAVU_006G060500g
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     PHAVU_006G060500g
SSDB
Motif
Pfam: Ge1_WD40 WD40 GerPC
Other DBs
NCBI-GeneID: 18627936
NCBI-ProteinID: XP_007146681
UniProt: V7BNQ9
Position
6:17757437..17766179
AA seq 1090 aa
MMASPNNHHPNTNTNTHPSPPPFDMHSFFNPPPPSSNPNPNPSPSSSYPPPFPAAAPFHF
PAFDLPLHPHHRSLSFPTQPIPPPSNPNAGARLMALLSNPSPPPPDYAPPSSTPSAVLAA
ATAAAAALTRLPSGKVPKGRHLSGERVAYDVDVRLPGEVQPQLEVAPITKYGSDPNPVLG
RQIAVNKSYICYGLKQGNIRVLNIHTAVRSLLRGHTQRVTDLAFFAEDVHLLASVGTDGR
VYVWKISEGPDDEDKLQITANIVIAIQIVGEEKVEHPQICWHCHKQEILIVGMGKHVLRI
DTTKVGNGETFVAEDPPLRCPVDKLIDGVQLVGTHDGEVTDLSMCQWMTNRLVSASQDGT
IKIWEDRKTQPLEVLRPHDGHPVFSATFFTAPHQPDHIVLITAGPQNREVKLWVSASEEG
WLLPSDTESWKCTQTLELKSSAQQSRDAFFNQVAALSHAGLLLLANAQRNAIYAVHLEYG
PNPESTRMDYIAEFTVTMPILSFTGTSDILPHGEHIVQVYCVQTQAIQQYALDLAQCLPP
PLDNVGPEKSDSCVSGDAVTVEGFHNLDSSAPKIMLQAGSTESGLVARYPLSSGHVEAPI
TCSNTEAKPVTLAPSSSDPDIVCIPSPPLPLSPRLSRKLSDIRSPQSNLSDHVGEHPVND
YSIDRQMDTIHRNLSETFSSDSKNDEKKVKQDHISSVLSPSVMFKQPTHLITPSEITKAG
SSSSENNIVDRKSEGEAKIQDVGSAEVEVKVVGETRSNQIDEFGRQGSQQNPISDSKEKI
FCSQASDLGIEMAREGCVIATGDTFLTEEPGQIDSMGAMSPAQPPDTGEDGLQDMAKDAH
EKVSDSSTSVAVPPSPVPNAKGKRQKGKNSQASGLPSSSPSVFNSTDSSNEPNGNSSLPS
AENAQILAMQESINQLLTMQKEMQKQMTMMVAVPVTKEGRRLEAALGRNMEKAVKANSDA
LWARIQEENAKNEKLLRDRIQQITGLISNFMNKDLPAILEKTVKKEMASVGQAVVRAMSP
AVEKIISSAIVESFQRGVGDKAVNQLDKSVSSKLEATVARQIQAQFQTTGKQVLQVRQGF
HSTVLLHSWS
NT seq 3273 nt   +upstreamnt  +downstreamnt
atgatggcttccccaaacaaccaccacccaaacaccaacaccaacacccacccttctcct
cctcccttcgacatgcactccttcttcaaccctccgcccccttcgtcaaaccctaaccct
aaccctagcccttcatcctcataccctccgcccttccccgccgccgcgccctttcacttc
ccggccttcgacctccctctccacccccaccaccgctccctctccttccccacccagccc
atccctccgccctccaaccccaacgccggagcccgcctcatggccctccttagcaacccc
tcccccccgccccccgactacgcgcctccctcctccaccccctctgctgtcctcgccgct
gccactgccgccgcagccgccctcacgcgactccccagcggcaaggtccccaagggaagg
cacctctccggggagcgcgtcgcctacgacgtcgacgtccggctgcctggcgaggtccag
ccgcagcttgaggttgctccgatcacgaaatacgggtcggaccctaacccggttttgggg
aggcagattgcggtgaataagtcctatatatgctatgggctgaaacaggggaacattagg
gtgcttaatatccacactgctgtcaggtctctcctcagaggccacactcagagggtcaca
gacttggcgttttttgctgaagatgttcatctcttggctagtgttggcacagatggtcga
gtttacgtgtggaagatctctgaaggtccagatgatgaagataagcttcaaattacagcc
aatattgttattgctattcaaatagtgggggaggagaaagttgaacatcctcaaatttgc
tggcactgtcataaacaagagattttgatagttggtatgggaaaacatgttttgagaatt
gacaccacaaaagttggaaatggtgaaacgtttgtggcggaggatcctcctctgagatgt
cctgttgacaagctcattgatggggttcagctggtaggcacgcatgatggagaggtgact
gatttatctatgtgccaatggatgaccaatcgattggtatctgcgtcgcaggatggcacg
ataaagatctgggaagatcgcaagacacaaccacttgaagttttgagaccacatgatgga
catccagttttttctgctacatttttcactgctcctcaccagcctgatcatattgtcctt
atcacagcaggaccacaaaatcgggaggtgaagctttgggtatcggcaagtgaagaaggt
tggctgctcccaagtgacactgaatcatggaaatgcactcagacgttggagttgaagagt
tcagctcaacaatctagagatgcattctttaatcaagttgcagcattgtctcatgcaggt
cttcttttacttgcaaatgcccagaggaatgctatatatgctgtacatttagaatatggt
cctaatccagaatcaacacgcatggattatatagctgagtttactgtgaccatgcccatt
ctgagttttactgggacaagtgatatactacctcatggtgaacatattgttcaggtttac
tgtgtccagacacaggctattcagcagtatgctttggatttagcccagtgcttgcctcca
ccattggataatgtgggaccagagaagtcagattcctgtgtttctggggatgcagttact
gttgaaggattccacaatttagactcttctgctcccaaaataatgttacaagcaggtagt
actgaaagtggactcgtggccagataccctttaagctctggccatgttgaggcacctatt
acatgttcaaacactgaagctaaacctgttacattagctccttctagtagtgatcctgat
attgtttgtattccatctccacctcttcctttaagcccaaggttatctaggaaactctct
gatatcaggagtccacagtcaaatttgagtgatcatgttggggaacatcctgttaatgat
tattccatagatagacaaatggataccattcacagaaacctctctgagacatttagtagt
gattcaaagaatgatgagaagaaagtgaaacaggatcacatttctagtgtacttagtcct
tctgtcatgtttaagcagccaacccatctaatcaccccatctgagatcacaaaggctggt
tcctcctcctccgagaataatatagttgataggaagagtgagggagaagcaaagatccag
gatgtgggtagtgctgaagtggaagtgaaggtggtgggtgagacaagatctaatcaaatt
gatgaatttggtcggcaagggtcacaacaaaatccaatttcagatagtaaagaaaaaata
ttttgctctcaggcttcagatcttggtattgagatggctcgagaaggctgtgtgatagct
actggggacacattccttacagaggaacctggacaaattgattcaatgggagcaatgtca
ccagctcaacctcctgatactggtgaggatggactccaagatatggcaaaagatgcccat
gaaaaggtttctgactcatctacatctgtggctgtgccaccatctcctgtgcctaatgca
aaagggaaaagacagaagggtaaaaattctcaagcatcaggcctaccttcctcatctcca
agtgtgtttaattcaactgattcatccaatgaaccaaatggaaattctagccttccgtct
gctgaaaatgctcaaattctggcaatgcaggaatcaatcaatcagttactgacaatgcaa
aaagagatgcaaaaacaaatgacaatgatggttgctgttccagtgacaaaagaaggtaga
aggcttgaggctgccctagggagaaacatggaaaaagctgtcaaggccaacagtgatgct
ttatgggctagaatccaggaggagaatgcaaaaaatgaaaagttgttacgagaccgtatc
cagcaaattacaggtctgattagtaactttatgaataaagatctaccagcaatactggag
aaaactgtaaagaaggaaatggcctcggttgggcaagcagtagtacgtgcaatgtctcct
gctgtggagaaaataatatcttctgctattgttgaatccttccagagaggagtgggtgat
aaggcagtgaaccaacttgataaatcagttagttcaaaactggaagctaccgtagctagg
caaatccaggcacaatttcagacaactggcaaacaggtgcttcaggtacgtcagggcttt
cactcgactgtattgctccattcttggagttag

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