KEGG   Phaseolus vulgaris (common bean): PHAVU_010G130700g
Entry
PHAVU_010G130700g CDS       T03093                                 
Name
(RefSeq) hypothetical protein
  KO
K03126  transcription initiation factor TFIID subunit 12
Organism
pvu  Phaseolus vulgaris (common bean)
Pathway
pvu03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:pvu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    PHAVU_010G130700g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pvu03021]
    PHAVU_010G130700g
   03036 Chromosome and associated proteins [BR:pvu03036]
    PHAVU_010G130700g
Transcription machinery [BR:pvu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     PHAVU_010G130700g
   Coactivators
    SAGA/TFTC/STAGA complex
     PHAVU_010G130700g
Chromosome and associated proteins [BR:pvu03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     PHAVU_010G130700g
    STAGA complex
     PHAVU_010G130700g
    TFTC complex
     PHAVU_010G130700g
    SAGA complex
     PHAVU_010G130700g
    SLIK complex
     PHAVU_010G130700g
SSDB
Motif
Pfam: TFIID_20kDa Histone
Other DBs
NCBI-GeneID: 18618302
NCBI-ProteinID: XP_007135452
UniProt: V7ATA8
Position
10:complement(40081770..40091592)
AA seq 587 aa
MAESASLSSKPSPMDPQNPAASSNPTIPSPSHNMPSPSLPPLPQDHQHQQQQQNLHQQLS
PPQQQQPLVSSQAMNTINGINPISNFQLQQTLQRSPSMSRLNQIQPQQQSQQQQQFGVMR
QQAGLYGGQMTFATAGGGAGQQQQLGGSNLSRSALIGQSGHFPMLSSAATQFNLLSSPRQ
KGGLVQQSQFSGNSAGQSLQGMQAMGMIGSQNLTSQLRANGAVAYAQQLRMSQGQIRQQM
SQQSSLNTGQVQGLPRSSSLAFMNSQLSGLSQNGQPAMVHNSLTQQQWLKQMPAMSSPAS
PLRLQQRQQLASSTQLQQNSISLNQQQLSQLIQQQKSIGQPQLHQQQQQQQPQQLQQQLQ
QQLIHQQPQQQSQPQASVHQQQQSPRMPGPAGQKSFSLTGSQPDATASGATTPGGSSSQG
TEATNQVLGKRKIQDLVAQVDPQGTLDPEVIDLLLELADDFIDSTTTHGCILAKHRKSPT
LESKDLLLHLEKNWDLTVPGYSSEEKKYQSKPQLNDLHKRRLDMIRTLMESSASESNINS
SKELSRQGISNPTPVAVGAHHLVRPLSSEQLVSHAAGSQMLQQMTRF
NT seq 1764 nt   +upstreamnt  +downstreamnt
atggcggaaagcgcatcactgtcgtccaaaccctcaccaatggaccctcaaaaccccgcg
gcatcttccaaccctacaatcccttccccttcccacaacatgccttcaccctcgctccct
ccgctcccccaagaccaccaacatcaacagcagcagcagaatcttcatcaacaattgagt
ccccctcaacaacaacagcctctcgtgtcgtcgcaagccatgaacaccatcaacggcatc
aaccctatctccaatttccaactccagcagacgctgcagcgatcgccttccatgtcgcgc
ctcaatcaaatccagcctcagcagcagtcgcagcagcagcagcagttcggcgtcatgcgc
cagcaggccggattatacggcggacagatgaccttcgccaccgcgggcggcggagcgggc
cagcagcagcagttgggcggttccaatttgtcgcggtccgcgttgatagggcagagcggg
cacttccccatgttgtctagtgctgccacgcagtttaacttgctctcctcgccaaggcaa
aaaggtgggctagttcagcagtctcaattctcaggtaattctgctggacaatcactgcaa
ggaatgcaagcaatgggcatgattggatcacaaaatctcacctcacaactgcgagctaat
ggagctgtggcttatgcacagcagctgcgaatgagtcagggtcaaatcaggcagcaaatg
tcacagcagagttcacttaacactggacaggttcaaggtttaccaaggtcatcatccctt
gcttttatgaattctcagttgtctgggttgtctcagaatgggcaaccagcgatggttcat
aactccttaacacagcaacagtggcttaagcaaatgccggcaatgtctagccctgcctca
ccattgcgtcttcaacagaggcagcagctggcttcttctactcaattgcaacaaaactct
ataagccttaaccaacaacaattgtcccagctgattcagcaacagaaatcgatagggcag
cctcagctgcatcagcagcaacaacagcagcagcctcagcagctgcaacagcaactgcaa
caacagctcatacatcagcagccacaacagcagtctcagccacaggcttctgttcatcaa
cagcaacagtctccaaggatgcctggacctgcaggccaaaagtcattcagtctaacagga
tcacagccagatgctactgcatctggtgcaactacaccaggtggtagttctagccaagga
actgaagcaacaaaccaagttctggggaagagaaagatacaggatttagttgcacaggtg
gatccacaaggtacactggaccccgaagttatagatcttcttttagagcttgctgatgac
ttcattgattctacaactacacacggttgcattttggcaaaacatagaaaatcgccaact
ttggagtccaaggatttattgctacacctagagaaaaattgggatttaacagttccgggg
tattcgagtgaagagaagaagtatcaaagcaaacctcaattaaatgacctccacaagagg
cgcttagatatgattcgcacattgatggaatcttcggcctctgagtcaaatattaacagt
tctaaagagttgagtagacagggcatttctaatcctacccctgtggctgtgggagctcac
catctagtaagacccttgagttcagagcagttggtttctcatgcagctggttctcaaatg
ctacagcagatgacaaggttttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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