KEGG   Phaseolus vulgaris (common bean): PHAVU_L0001001g
Entry
PHAVU_L0001001g   CDS       T03093                                 
Name
(RefSeq) hypothetical protein
  KO
K10801  methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
pvu  Phaseolus vulgaris (common bean)
Pathway
pvu03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pvu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    PHAVU_L0001001g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pvu03036]
    PHAVU_L0001001g
   03400 DNA repair and recombination proteins [BR:pvu03400]
    PHAVU_L0001001g
Chromosome and associated proteins [BR:pvu03036]
 Eukaryotic type
  Heterochromatin formation proteins
   MBPs (metylated DNA binding proteins)
    PHAVU_L0001001g
DNA repair and recombination proteins [BR:pvu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     PHAVU_L0001001g
SSDB
Motif
Pfam: HhH-GPD
Other DBs
NCBI-GeneID: 18642825
NCBI-ProteinID: XP_007163987
UniProt: V7D3X8
Position
Unknown
AA seq 197 aa
MSVKSKPLVQKNVAHAIRYVSPYFHNDSGKNIDVKPLDEGSKFESIALHATENFVEDKPE
ENKSSCSEKSIEIKKNLSASEKWDEAYKRKTPDITWKPPRSATVLIQEDHAHDPWRVLVI
CMLLNRTSGRQTKNIVSDFFKLCPDAKSCTEVSREEIEETIKTLGFQHKRAKMLKRLSEE
YLDESWTHVTQLHGVGK
NT seq 594 nt   +upstreamnt  +downstreamnt
atgagcgtgaaatcaaaacctctagttcagaaaaatgttgcccatgctattagatatgtt
tccccttattttcataatgatagtgggaagaacattgacgtgaaacctttggatgaggga
agcaagtttgaatctattgctttacatgccactgaaaatttcgtggaggataaaccagag
gaaaataaatctagttgcagtgaaaaatctattgaaattaaaaaaaatctttctgcttct
gagaagtgggacgaggcttacaaaagaaaaactcctgatattacatggaagcctccccgc
tctgcgactgttctcattcaagaggatcatgctcatgacccttggagggtgttggtcatt
tgtatgcttctcaatcggacttctggtagacagacaaaaaatattgtgtcagactttttc
aagttatgcccagatgcaaaatcttgcacagaagtttcacgcgaggaaattgaagaaaca
ataaagacattaggttttcaacacaaaagagcaaaaatgttaaagcgtctctctgaggaa
tacttggacgaaagctggactcacgtaactcaattgcatggggttgggaagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (1)   
   Pfam (1)   
All databases (17)   

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