KEGG   Plasmodium vivax: PVX_088885
Entry
PVX_088885        CDS       T01073                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8, putative
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
pvx  Plasmodium vivax
Pathway
pvx03018  RNA degradation
pvx03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pvx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PVX_088885
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PVX_088885
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pvx03019]
    PVX_088885
   03041 Spliceosome [BR:pvx03041]
    PVX_088885
Messenger RNA biogenesis [BR:pvx03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     PVX_088885
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     PVX_088885
Spliceosome [BR:pvx03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    PVX_088885
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 5474161
NCBI-ProteinID: XP_001614870
UniProt: A0A1G4GT53 A5K5F8
Position
5:complement(133785..135198)
AA seq 95 aa
MTSINIESYLENEILVITNDSRIFTGKLKGFDQTTNIILGNCYERIYKESLEKISLGLYI
IRGDTVTLIGEIDEDVDKNILHHKIKPETLKPIVH
NT seq 288 nt   +upstreamnt  +downstreamnt
atgacgtctataaacatcgaatcgtacttagaaaacgaaatattagtcataacgaatgat
agtcgaatttttaccggcaaactgaaaggcttcgaccagacgaccaacatcatccttggc
aattgctacgagaggatttacaaagagtcgctggagaaaatcagcttgggcctgtacatc
atacgaggggacaccgtaaccctaattggcgagatcgacgaggatgtcgataagaacatt
ctacaccacaagataaaaccagagacgttgaaaccgatcgtacattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (15)   

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