KEGG   Pectobacterium wasabiae: Pecwa_4387Help
Entry
Pecwa_4387        CDS       T01106                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
pwa  Pectobacterium wasabiae
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:pwa00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Pecwa_4387
Enzymes [BR:pwa01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Pecwa_4387
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Pecwa_4387
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(4810539..4811348)
Genome map
AA seq 269 aa AA seqDB search
MPELPEVETSRRGISPYLVGHTIFYAEVRNSRLRWPVSAEILSLSDEPVLSVRRRAKYLL
IELTGGWIIVHLGMSGSLRVLPEYTEPEKHDHVDLVMDSGKVLRYTDPRRFGAWLWTDNL
ETCSVLAHLGPEPLEAEFSSDYLYQASRNKKTAIKQWIMDNKVVVGVGNIYASESLFAAG
IHPDRAAGSLNESDATVLVRVIKQVLQLSIEQGGTTLRDFLQSDGKPGYFAQELRVYGRS
GEPCRTCGTPIETAKHGQRSTFFCRCCQK
NT seq 810 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaattacctgaggttgaaaccagtcgccggggaatttcaccctatctcgtcggc
cataccatcttttatgcagaagtgaggaattcgcgcctgcgctggccggtatcggctgaa
attctttcactaagcgatgagcctgtgctaagtgtgcgtcggcgggcaaaatacctgctg
attgagctcactggcggctggattatcgtgcatcttggtatgtctggcagcctgcgggtg
ttgccggaatataccgaacctgaaaagcacgatcatgttgatttggtgatggacagcggt
aaagtgctgcgttacaccgatccccgacgttttggtgcctggctgtggacggataatcta
gaaacctgctcggtattggcacatctggggccggagccattagaggcggaattctcctcg
gattatctctatcaggcttcacgaaataaaaaaacggcgatcaaacagtggattatggat
aacaaagtggtggttggcgtaggtaatatttacgcaagcgaatcgttgtttgctgctggt
atccaccctgacagagcggccggatcgttaaatgaaagcgatgcaacggtattggttcgc
gtgattaaacaggtgctacagctttcgattgagcagggtggcacgacgctgcgtgacttt
ttgcaatcagatggtaagcccggttatttcgcgcaggagctacgagtctatggccgcagc
ggcgaaccttgccggacatgtgggacaccaatagaaaccgcgaaacatgggcagcgtagc
acttttttttgtcgctgctgtcagaagtaa

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