KEGG   Pyrus x bretschneideri (Chinese white pear): 103932727
Entry
103932727         CDS       T03446                                 
Name
(RefSeq) CCR4-NOT transcription complex subunit 10-like
  KO
K12607  CCR4-NOT transcription complex subunit 10
Organism
pxb  Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pxb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    103932727
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pxb03019]
    103932727
Messenger RNA biogenesis [BR:pxb03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     103932727
SSDB
Motif
Pfam: TPR_2 TPR_14 TPR_1 TPR_12 TPR_19 TPR_11 TPR_8 TPR_10 SRP_TPR_like DUF627 TPR_3
Other DBs
NCBI-GeneID: 103932727
NCBI-ProteinID: XP_009340640
Position
Unknown
AA seq 837 aa
MASSSSPSSTAANRDGSASAAEDEAVMSVTRVFAQDALLQFQSGKFDKCLTALSECLKRK
PNDPKISHNIGLAEFYRDGCSDPKRLLDVLNNVKKRSEELARTSAEQVESGSNTGDKVAL
GSKGSGAMGHSFSAVYMDEFDTYVAILNIAVIWFHLHEYAKALSVVEPLFQNRGPIDEKT
ALNICLLLLDVGLACHDAMKSADVLIYLDKAFGVSCMNQGDGGSTALQQPANPVAKPPSL
STNSSATDGPTLDSDPNALEPEETSEFDNADFDMDVAQPTVLLSSNDISRNPVDISASSV
YLKLKMQLYKVQFLLLTRNLKQAKREVKNAMNIARGRDSSMALLLKSQLEYARGNYRKAI
KLLMASSNRTDTRLSSMINNNLGCIYYQLGKYHTSSVFFSNALLNCSSLRKDRPLNLSTF
SQDNSHLIVYNCGMQNLACGKPLLAARCFQKAGLVFYNQPLLWLRFAECCLMALEKGLMK
TNLASSEVRVYVIGNGKWRQLVMEDGVSKNGNLGSFERGDLFLGSDRQPKLSVSLARQCL
LNALSLLNRSESSYCKNSLPSNFFLEDNELGEVAASKNSNHKNFHSMNSEASVLSVGLGQ
VGINGDGKEQRAGTTRELVQNSLSYYADVRNKENLLIKQALLANLAYVELELENPMKAFS
IARSLLELPECSRIYIFLGHVYAAEALCLLNRLKDAADHLMTYLSGGNDVELPFSEEDCE
QLQGVRADDYEESNGGSMAARNSSPEDRLGIAFLKPEEARANLYVNFAALYAMQGELDQA
RQFVAQALSITPNSPEATLTAVYVDLKAGRSQEALAKLKHCSRITFVPSGLTLNKAS
NT seq 2514 nt   +upstreamnt  +downstreamnt
atggcttcgtcttcgtctccgtcatcaacggcggcgaatcgggacggttctgcttcagct
gccgaggacgaagccgtcatgtccgtgacccgagtttttgcgcaggatgcgttgctgcaa
ttccagtcgggcaagttcgataagtgccttaccgccttgtccgagtgcctcaagaggaag
cccaacgatcccaaaatatctcataatattggacttgcggagttctatcgagatggttgt
tcagatcctaagaggttgcttgatgtgcttaataatgtcaagaagcgaagcgaagagctt
gctcggacatctgcagaacaggtggagtctggcagcaatactggagataaagttgcgttg
gggtccaaaggaagtggtgcaatgggacattccttttctgctgtttacatggatgaattt
gacacttatgttgctatcttaaacattgcggttatctggttccatcttcatgaatatgca
aaggcattgtccgttgttgaaccgctttttcaaaatagaggacctatagatgagaaaact
gctcttaatatctgccttttgttgctggatgttgggctggcttgccatgatgcaatgaaa
tctgctgatgttttgatttatctggataaagcttttggtgtgagttgtatgaatcaagga
gatggtggaagcactgctttgcaacaacctgcaaacccagttgcaaagccgccatctctt
tctaccaattcatcagccacagatggtcctactttggattcagatccgaatgctttggag
cctgaggagactagcgagtttgataatgcagattttgacatggatgttgcacaacctact
gttctattatcttcaaacgatatttctaggaatccggttgacatatctgcctcttctgtt
tacctgaagcttaagatgcaactttacaaggttcagtttctgcttctcacgaggaactta
aagcaagctaaacgtgaagtgaagaatgctatgaatattgcacgtgggagagattcttct
atggctctcctcttgaagtcccagcttgaatatgctcgtggtaattatcgtaaagccatc
aagttgttgatggcatctagtaatcgaacagacacaaggttatcgagcatgatcaacaat
aatctaggctgcatttattaccagcttgggaaatatcacacatcatcagtgttcttctcc
aatgcattgcttaattgctcatctctccggaaggaccggcctctaaatctctcaactttt
tcacaggacaattcccacttaatcgtatacaactgtggtatgcagaacttggcttgtggg
aaaccactacttgctgcgcgctgtttccagaaggctggtttagttttctacaatcagcct
ctgctgtggcttcgatttgctgagtgctgtctgatggctttggaaaagggattaatgaaa
accaatctggcatcatcagaagttagagtttatgtcattggcaacggaaagtggaggcaa
ctagtaatggaagatggggtttcgaagaatggaaacttgggttcttttgaaagaggtgat
ttatttttgggcagtgatcggcagcctaagctctcagtgtcccttgcccggcagtgtctc
ttgaatgccctgtccttactgaaccgttctgagtcaagctattgtaagaattctttgccc
tctaatttcttcttagaagataatgaattaggggaagtggcagcttccaagaattcaaac
cacaagaactttcacagcatgaattccgaggcatctgtgctatctgtaggcttgggtcag
gttggcataaatggggatggaaaagagcaaagggcaggaactactcgggagcttgtgcag
aactcgctttcatattacgctgatgttcgtaacaaggaaaatctgttgatcaaacaagct
cttttggcaaacctggcatatgtggaattggaattggaaaatcccatgaaggccttttca
atcgcaagatctctcttggaacttccagaatgttcgagaatttacatcttcctaggtcat
gtgtatgccgcagaggctctttgcttgctaaacaggctaaaggatgctgctgaccatttg
atgacatatttgtcaggaggtaacgacgttgaattaccattcagtgaagaggactgtgaa
caactgcaaggggtcagggctgatgattatgaagagtcgaacggaggatcaatggctgcc
agaaactcatcacctgaagacagattaggtattgcgttcctcaagccagaagaagcacgg
gcaaacctgtacgtaaattttgctgccttgtacgctatgcaaggtgaacttgaccaggct
cgccagtttgttgcacaggcattgtccataacacccaacagtccagaagcgactttgact
gcagtgtatgtggatctcaaggccggtcggtcacaggaagctcttgccaagctaaaacac
tgtagtcgaatcacatttgtaccaagcggattgacattgaacaaagcatcttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (11)   
   Pfam (11)   
All databases (27)   

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