KEGG   Pyrus x bretschneideri (Chinese white pear): 103947078
Entry
103947078         CDS       T03446                                 
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH5, mitochondrial-like
  KO
K14442  ATP-dependent RNA helicase DHX36 [EC:3.6.4.13]
Organism
pxb  Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pxb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    103947078
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pxb03019]
    103947078
Messenger RNA biogenesis [BR:pxb03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     103947078
SSDB
Motif
Pfam: OB_NTP_bind HA2_C Helicase_C DEAD dsrm HA2_N AAA_22 Dicer_dimer nSTAND3 AAA_19 ATPase NACHT AAA_11
Other DBs
NCBI-GeneID: 103947078
NCBI-ProteinID: XP_009356199
Position
Unknown
AA seq 1209 aa
MPSSFLLLHPSPPSLQFPHASSPSPSHPKLIASSSKPSLLAMKDRPPSSYGSVYVPPHHR
LRSAITTPNYTSTTSVGSKLRDNQTAAALNQRSSTNGALAYYQTQQQQFQKPKLQHSSAY
DDGVSEEGSDREAELPSHPTQSPYSCDNEWERKLTMLLCDKEKQELVTREKKDRCDFEKI
AALASRMGLYSHLYSKVAVFSKVPLPNYRFDLDDRRPQREVTLPLGLLRRVEGYLGEFLS
QKSRTKEDLSFSTSNSSGSIATDEGLFEQPESFASSKGVMEKLLWRRSMQLHDKQQAWQE
SPEGRKMLELRRSLPAYKEKDALLAAISRDQVVIISGETGCGKTTQIPQFILESEIEAVR
GAVCSIICTQPRRISAMSVSERVASERGEKLGDSVGYKVRLEGMKGRDTHLLFCTTGILL
RRLLVDRNLKGITHVIVDEIHERGMNEDFLLIVLKDLLPLRPELRLILMSATLDSELFSS
YFGRAPIIHVPGFTYPVRTHFLEDVLEITGCKLMPYNQIDDYGQEKMWKMSKQAPRKRKS
QIASVVEDALKAADFKEYSPQTRESLACWNPDSIGFYLIEYLLCNICESDKPGAILVFMT
GWDDINSLKEKLHANPLLGDPSQVLLLACHGSMASTEQRLIFDEPEDGVRKIVLATNIAE
TSITINDVVFVLDCGKAKETSYDALNNTPCLLPSWISKVSAQQRRGRAGRVQPGECYHLY
PKCVYDAFAEYQLPEILRTPLQSLCLQIKSLNLGSISEFLSRALQSPELLAVQNAIEHLK
ITGALDEKENLTVLGRYLTMLPVEPKLGKMLLLGAIFNCLDPVLTIVSGLSVRDPFLTPF
DKKDLAEAAKSQFSRDNSDHLALVRAYEGWKVAERDFAGYDYCWKNFLSAQSMKAIDSLR
KQFFSLLRDTDLVDANTTTHNAWSYDEHLIRAVICYGLYPGICSVVHNEKSFSLKTMEDG
QVLLYSNSVNARDSKIPYPWLVFNEKIKVNSVFLRDSTAVSDSVLLLFGGSFSKGDTDGH
VKMLGGYLEFFMKPAVAEMYQCLKGELDQLIQIKLLNPRMDTHSYHELLSAMRLLLSEDQ
GEGRFVFGRQVLALSKSKPSVVAAQPALVSRTESGPGGDNSKSQLQTLLTRAGYNAPTYK
TMQLKNSQFRATVEFNGMQIMGHPCNNKKSAEKDAAAEAIQWLVSGTQMGHEDINHMSMM
LKRSKKDHN
NT seq 3630 nt   +upstreamnt  +downstreamnt
atgccctcttctttcctcctcctccacccatctcctccgtctctgcaattccctcacgcg
tcgtcgccgtcgccttcacatcccaaactgattgcctcctcctccaaaccctcactcctg
gcgatgaaggatcggcctccttcctcgtacggctccgtctacgtccctccccaccaccgc
ctccgctccgccatcaccacccccaattacacctccactacttcagtcggctccaagctc
cgcgacaaccagactgctgctgctctcaaccagaggagcagcaccaatggtgctctggcg
tactaccagactcagcagcagcagtttcagaagcccaagcttcagcactcttctgcttac
gacgacggcgtttccgaggaaggctccgatcgcgaagctgagttgccgtcgcatccgaca
cagagtccttactcatgtgataatgagtgggaacggaaattaaccatgctgttatgtgac
aaggagaagcaagagttggttacaagggagaaaaaagatagatgcgactttgagaaaata
gctgctttggcaagcagaatggggctttatagccatctgtattcgaaagttgctgtgttt
agtaaggtcccactgccaaactacagatttgacctggatgataggcgccctcagagagag
gtgaccttgcctcttgggttgctgaggagagttgagggatatcttggagagttcctttcc
cagaagtctaggacaaaggaagatctttccttttctacatcaaacagtagtggcagcatt
gctactgacgaagggctttttgagcaaccagaatcatttgcgtcaagtaagggtgtgatg
gaaaaacttctttggcggagaagtatgcagctgcatgataagcaacaagcttggcaggaa
tctcccgaaggtagaaaaatgcttgaacttcgcagaagtcttccggcctataaagagaag
gatgcattattggcagcaatttcacgagatcaggttgttatcatatcaggtgaaactggc
tgtggcaagactactcaaattccacaattcattttagaatctgagatagaagctgttcgt
ggagctgtttgtagtattatatgtacacagcctagacgaatatctgctatgtctgtttct
gaaagagttgcttcagagagaggggagaaattgggtgactcagttgggtataaggttcgg
ttagaaggtatgaaggggagggacactcaccttctcttttgcaccactggcattttgttg
agaagattactagttgatagaaatttgaaaggtataactcatgtgattgtggatgaaatt
catgaacgtggaatgaatgaagattttctgcttattgttctcaaggatctccttcctctg
cgaccagaacttaggctgattttgatgagtgcaaccctagattctgagcttttctcatcc
tactttggtagagctccgataattcatgttccaggttttacatatccagttcgaactcat
tttctggaggatgttctggaaattacgggatgcaaattaatgccatacaatcagattgat
gattatggtcaagaaaagatgtggaaaatgagcaaacaggcgccaagaaagaggaaaagc
caaattgcttctgttgttgaggatgcacttaaagcagccgattttaaggagtatagtccg
cagactcgggagtctctagcatgttggaatcctgatagtatcggtttttatctcattgag
tatctcttgtgcaatatctgtgagagtgacaagcctggtgccattctagtttttatgact
gggtgggatgacatcaattctctgaaggaaaagttacatgccaatcctctattaggtgat
ccaagccaagtcttgttactagcatgccatggttctatggcaagtactgagcagaggtta
atatttgatgagcctgaggatggagtgaggaagatagtgctggctactaatattgctgag
acaagcatcacgattaatgatgttgtttttgtacttgattgtggaaaggcaaaagagact
tcatatgacgcactgaataatactccttgtttgcttccttcctggatttccaaggtttct
gcccaacaaagaagaggaagagcaggacgtgtccagcccggggaatgttatcatctctat
cctaaatgtgtgtatgacgcatttgcagagtatcagttgccagagattttgaggacacct
ctgcagtctctctgtctgcaaataaaaagtttaaacctcggaagcatttctgagttctta
tctagggctctgcagtcaccagagttacttgcggtgcaaaacgccatagagcatttaaag
atcactggggcattggatgagaaagagaatctgactgttttaggacgctatctaactatg
cttcctgtggagccaaaacttggaaagatgctcttgctaggcgccattttcaactgcctg
gatccagttttgactattgtttctgggcttagtgtcagagatcccttcctaacaccattt
gacaagaaagaccttgctgaggctgcaaaatctcagttttcccgagataatagtgatcac
cttgcacttgtgcgggcctatgagggctggaaggttgctgaaagagactttgctggatat
gactattgctggaagaattttctttcagcccaatcaatgaaagctattgattcccttagg
aagcagttcttctctttgcttagggatactgatcttgttgatgctaacaccaccactcat
aatgcatggagttatgatgagcatctcatccgtgcagttatttgctatgggctgtatcct
ggaatctgctctgttgtgcacaatgagaagtcattttcactgaaaacaatggaggatggg
caggtgctgctatactcgaactctgtcaatgctagggattctaaaattccatatccatgg
ctggttttcaatgagaagataaaggtgaactctgttttcctacgggattcaacagctgtg
tctgactcagtgctcctcctattcggtggaagtttttcgaaaggggataccgatggacac
gtgaaaatgctgggaggatatttggaattcttcatgaagcctgctgtagcagaaatgtat
caatgcttaaaaggggaacttgaccagttaattcaaatcaaactactgaaccccaggatg
gacacacatagttaccatgaacttctttctgcaatgcggttgctgctttcggaggatcaa
ggcgaaggtagatttgtatttggccgccaggtccttgcactctcaaagtcaaagccatct
gtggtggcagcacagccagccttagtttcaagaactgaaagtggacccgggggcgacaat
tctaagagtcagctccagacattgctcacacgagcaggatacaacgcacctacctacaaa
actatgcaactgaagaacagccagttccgagctacagtggagtttaacggaatgcaaatt
atgggccacccgtgtaacaacaagaagagtgcagaaaaagatgcggcagcggaggccatt
cagtggctggtgagtggaacacaaatgggccatgaggacatcaatcacatgtcaatgatg
ttaaagagaagcaaaaaggaccacaattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (13)   
   Pfam (13)   
All databases (28)   

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