KEGG   Pyrus x bretschneideri (Chinese white pear): 103948175
Entry
103948175         CDS       T03446                                 
Name
(RefSeq) tRNA wybutosine-synthesizing protein 2/3/4
  KO
K15450  tRNA wybutosine-synthesizing protein 3 [EC:2.1.1.282]
Organism
pxb  Pyrus x bretschneideri (Chinese white pear)
Brite
KEGG Orthology (KO) [BR:pxb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pxb03016]
    103948175
Enzymes [BR:pxb01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.282  tRNAPhe 7-[(3-amino-3-carboxypropyl)-4-demethylwyosine37-N4]-methyltransferase
     103948175
Transfer RNA biogenesis [BR:pxb03016]
 Eukaryotic type
  tRNA modification factors
   Methyltransferases
    103948175
SSDB
Motif
Pfam: TYW3 Met_10 Kelch_4 Kelch_3 Kelch_1 Kelch_6 Kelch_2 Kelch_5 MTS Cons_hypoth95 DNA_methylase TRM PrmA
Other DBs
NCBI-GeneID: 103948175
NCBI-ProteinID: XP_009357450
Position
Unknown
AA seq 1030 aa
MEFEKRKAATLASLRSEETDKSPKGTVDAPIIPLLDAINSHPNYFTTSSCSGRISILSQP
THVTNQPKTKKKALGGTWIFISHDPADADSILGLLFRPHPNDQNDAQDQNDLVFRFEPLI
VAVECRDVASAQSLVSKAIACGFRESGITNSNRRVIIAIRCSIRMEGPLGSSREVMVSRE
YVRFLVGVANEKMEANRKRTEAFFQALQSEGGGFVGPTVANGEIAADGLSDSGSKEVPGG
CSLSVVEMEIAGEPEENLFLWGHSSCALEIKNRNGVLVFGGFGGMGRHGRRSSSWLVDPL
FGTLRAIDAASTPSPRLGHTSSLVGDCVFVIGGRADPEKILSDVWVLNTAKNEWKLLDCS
GDKFPPRHRHAAAVVGSKIYVFGGLNNDTISSSLHVLDTDNLQWKELIVSGEHPCARHSH
SMVAYRSQLYIFGGYSGERTLADLYVFDIQTCKWKNERAAGRSPHARFSHSMFVYKNYLG
VVGGCPVKQHCQELALLDLKVRVWRHVKLESSGEDLFVRSTANVVGDNLIMIGGGASCYA
FGTKFSKPIKINLLPLMSLDDNIKPDDREMHAQHYEMVNNEKGRQFQDRRAEGVQSLSEP
CDLNFESDLPMENGISQQVESYWILQLERKYAKVGKDILKKFGWLDLGRKVYSRKSGSHI
CFPVNEKFSCVFKENKHSLTDLSEGQSNHFVKPVIGEEFSVNEVNCSKALDILKECGATK
LAAEEVEVKRAAKSPAKVMNEIVGLLIKEKGLPAELLEELPARWERLGDIVVLPATSFKD
PIWDSLGMELWHVISKSLNAHRLARQGRVASTATRDSTLEILVGDNGWVEHRENGILYSF
DATKCMFSWGNLSEKLRMASMNCRNEIIVDLFAGIGYFVLPFLVRANAKLVYACEWNPHA
VEALRRNVQANSVSDRCIVLEGDNRIVAPKGVADRVCLGLIPTSEGSWVTAVRALRSEGG
MLHVHGNVKDSEEDSWAKHVSESISEIAKSEGHCWEVRVEHVERVKWYAPHIRHLVADVR
CRQSIRTWPN
NT seq 3093 nt   +upstreamnt  +downstreamnt
atggagttcgagaaacgaaaggcggcgacgctagcgtcactgcggtcggaggagacagac
aaatcaccgaagggcacggtggacgccccgatcatacccctcctcgacgccatcaacagc
caccccaattatttcaccaccagctcctgctccggccgtatctctatcctctcccagccc
acgcacgtgacaaatcagcccaagaccaagaagaaagctctaggtggcacgtggatcttc
atctcccacgacccggcggatgccgactctatcctcggcctcctctttcgcccccacccg
aatgaccagaacgacgcacaggaccaaaacgacctcgttttcagattcgagccgcttatt
gtggcggtggagtgcagggacgtggcgtcggcgcagtcgttggtttcgaaggcgattgct
tgcgggttcagagagtccggcattacgaattcgaaccggcgcgtgattatcgcgattcgg
tgctcaattcggatggaggggccgctggggagcagccgggaggtgatggtgtcgagagag
tacgtgaggttccttgtcggggtggcgaacgagaaaatggaggccaacaggaagaggact
gaggcatttttccaggctctgcagagtgagggtggagggtttgtgggtcccaccgttgct
aatggcgagattgcggcagatgggctttcggattctgggtccaaggaagttcctggtggt
tgtagtctgtctgttgttgagatggaaattgccggtgaacccgaagagaatcttttcctc
tggggtcattcgtcttgtgcattggaaatcaaaaaccggaatggtgttcttgtgtttggt
ggctttggaggcatgggaagacatgggagaagaagtagttcttggctggttgatccattg
tttggcactttgagagcaattgatgcagccagcactccgtctccacggttgggtcacact
tcgtctctggttggagattgtgtgtttgtcattggaggcagggctgatcctgagaaaatt
ttgagtgatgtttgggtcctcaatacggcaaagaatgaatggaagttattggattgttct
ggggacaaatttcctcccaggcatcggcatgctgcagctgttgtaggctcaaagatatat
gtgtttggtggacttaacaacgataccatcagttcttccttacatgttctcgataccgat
aatctgcagtggaaagagttgattgtcagtggcgagcatccatgtgccagacattctcac
tcaatggtggcatatagatctcaactatatatttttggaggatatagtggtgagagaaca
cttgcagacttgtatgtatttgatatccaaacatgtaaatggaagaatgaaagggcagct
gggagaagtccacatgcaaggttctcccactcaatgtttgtctacaagaattatcttggg
gttgttggtggttgtccagttaaacaacattgccaggagctagcactacttgatttgaag
gtccgtgtgtggaggcatgtgaaacttgaatccagtggtgaagatttatttgtgcgtagc
acagccaatgttgttggcgacaatcttattatgattggtggtggggcatcttgttatgca
tttgggacaaagtttagcaagcccattaaaatcaacttgcttcctcttatgagtttagat
gataatattaagccagatgacagagaaatgcatgctcaacattatgaaatggtgaataat
gagaaaggtagacaattccaggatcgacgggctgaaggtgtgcagagcttaagtgaacct
tgtgatctgaattttgagagtgacttgcccatggaaaatggcataagtcagcaggtagaa
tcatattggattctacaacttgaaagaaaatatgcaaaagtaggcaaggacatattgaag
aagtttggatggttagatcttggaaggaaggtgtactccaggaagagtggttcacatata
tgttttcctgtgaacgaaaaattttcatgcgtgtttaaagaaaacaagcattctttgaca
gatttatctgaaggacagagtaatcactttgttaaaccagttataggagaagaattctcg
gttaatgaggtgaactgttcaaaagccttggacattctaaaggaatgtggtgctactaag
ctggcagctgaagaagttgaagtcaagagagctgccaaatctcccgcgaaagtaatgaat
gaaattgtgggcttgctgataaaggagaagggactgcctgcagaactcttagaggagcta
cctgcaagatgggagcgacttggagatatagttgtccttccggcgacatcgttcaaggat
ccaatatgggactcactagggatggagctttggcatgttatttccaaatcacttaacgct
catcgccttgcacgccaaggccgagttgcgtcaaccgctacaagggacagtacattggag
attcttgtaggagataatggatgggttgagcatcgcgaaaatggcattctctattctttc
gatgctactaaatgtatgttctcctggggcaacctatctgagaagctccgcatggcctca
atgaattgcagaaatgagattattgtggatttgtttgctggaattggatattttgttctg
ccatttcttgtcagggccaacgcaaaactagtttatgcttgtgaatggaatccccatgct
gttgaggcactccggcgaaatgtgcaagccaattcagttagtgaccgatgcattgttctt
gaaggagataaccggatagtggcacctaaaggagtggctgatcgggtctgtctcggtctc
attccaacaagtgaaggtagctgggtcactgctgttagggcattaaggagcgagggcggg
atgctacacgtgcatgggaacgtcaaggactcagaggaggattcatgggctaaacatgta
tcagaatcaataagtgaaattgccaaatctgaaggtcattgttgggaagtaagagtagaa
catgtcgagagagtgaaatggtacgccccacacatccgtcatcttgttgcagacgttaga
tgtcgacagagtatccgaacatggccaaattag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (13)   
   Pfam (13)   
All databases (28)   

Download RDF
DBGET integrated database retrieval system