KEGG   Pyrus x bretschneideri (Chinese white pear): 103959293
Entry
103959293         CDS       T03446                                 
Name
(RefSeq) probable CCR4-associated factor 1 homolog 11
  KO
K12581  CCR4-NOT transcription complex subunit 7/8
Organism
pxb  Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pxb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    103959293
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pxb03019]
    103959293
Messenger RNA biogenesis [BR:pxb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     103959293
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     103959293
SSDB
Motif
Pfam: CAF1
Other DBs
NCBI-GeneID: 103959293
NCBI-ProteinID: XP_009369921
Position
Unknown
AA seq 283 aa
MYGDQDPTTPIQKPIVIREVWAHNLESEFELIQNVIDAYPFISMDTEFPGVVFRPPVDPT
TPYSRQALRPSDHYRILKSNVDALSLIQVGLTLSDSRGNLPDLGSPTRFIWEFNFNDFDV
ARDPHAPDSIELLRRQGIDFDRNRSHGVDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFG
YLVKILTRRDLPSGLNEFLKILRVFFGNRVYDVKHMMRFCKSLYGGLDRVARTLEVDRAV
GKCHQAGSDSLLTWHAFQKMRDVYFVHGGPEQHAGVLYGLEVF
NT seq 852 nt   +upstreamnt  +downstreamnt
atgtacggcgaccaagatccgacgactccgatccaaaagcccatcgtgatccgtgaagtc
tgggcccacaatctggaatccgaattcgagcttatccaaaacgtcatcgacgcctacccc
ttcatctccatggataccgagtttcccggcgtcgtcttccggccccccgtcgaccctacc
actccctactcccgacaggccctccggccctctgatcactacaggattctcaaatccaac
gtcgacgcgctcagcctcatccaggtcggactaaccctctccgactcccgcggtaacctc
cccgacctcggctcccccacgcgcttcatctgggagttcaacttcaacgacttcgacgtt
gcgcgtgacccccacgctcccgactccatcgaactcctccgccgccagggcatcgacttc
gaccgcaaccgctcccacggcgtcgactcctcgcgcttcgcggagctgatgatgtcgtcg
ggactcgtctgcaacgactcggtgagttgggtcacgtttcacagcgcctacgacttcggg
tacctggtgaagattctcacgcgccgggacttgcccagtggcttgaacgaatttctgaaa
attctgagggtctttttcggtaatagggtttatgacgtcaagcacatgatgcgattttgc
aaaagcttgtacggcggattggaccgggttgcgagaaccttagaggtggaccgggcggtc
gggaagtgccaccaggccggttcagatagcttgttgacatggcatgcgttccagaagatg
agggacgtgtactttgtgcatggcgggcccgagcaacacgctggagtattgtatggattg
gaagtattttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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