KEGG   Pyrus x bretschneideri (Chinese white pear): 103963970
Entry
103963970         CDS       T03446                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 14-like
  KO
K12823  ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
Organism
pxb  Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pxb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103963970
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pxb03041]
    103963970
   03009 Ribosome biogenesis [BR:pxb03009]
    103963970
Enzymes [BR:pxb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     103963970
Spliceosome [BR:pxb03041]
 Complex A
  U1 snRNP components
   U1 related factors
    103963970
 Complex B
    103963970
Ribosome biogenesis [BR:pxb03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    103963970
SSDB
Motif
Pfam: DEAD Helicase_C ResIII WW ERCC3_RAD25_C
Other DBs
NCBI-GeneID: 103963970
NCBI-ProteinID: XP_009375127
Position
Unknown
AA seq 667 aa
MAATATAAGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYDRPTSSAPPSKPSS
AQSISSSVHVQQSSQGQRRPDEGDDRYSRGSNGGSKFDTGSRTQQTARSATVSHNTPSGT
LSSHGGSSVKGNGSDTGSGLSAEAYSLRHEISVVGDNVPPPFTSFESTGFPSEILREVQS
AGFSAPTPIQAQSWPVALQSRDIVAIAKTGSGKTLGYLLPGFIHLKRTRNNPQMGPTVLV
LSPTRELATQIQDEAVKFGKSSRISCVCLYGGAPKGPQLRDIDRGADVVVATPGRLNDIL
EMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVKEIPARRQTLMYTATWPKEVRKIAAD
LLVKPVQVNIGNVDELVANKSITQYVEVLTSMEKHRRLEQILRSQEPGSKIIIFCSTKKM
CDQLSRNLTRQFGAAAIHGDKSQSERDYVLNQFRSGRTPILVATDVAARGLDIKDIRVVI
NYDFPTGVEDYVHRIGRTGRAGATGLAYTFFGDQDAKYASDLIKVLEGANQRVPPEIREL
ASRGGGMNRFRRWGSGPSGGRDGGRGQNDSSYGGRDGGRGGGYGFTPSSGRYGQSNGYDR
GRSPSPVKASGYRARSRSPERFDKALPTGGGSAGGWSFHKAMMERERSSPPRRRNAEEAE
EGMIHPE
NT seq 2004 nt   +upstreamnt  +downstreamnt
atggctgccactgcaactgctgctggtcctcgatatgctccggaggacccaactctcccc
aaaccatggagaggtctggttgatggtaaaactgggtatctttacttctggaacccggag
accaacgttacccaatatgataggccaacgagctcagcacctccatcaaagccctcttct
gcacagtctataagttcctcggttcatgttcaacaatcttcgcaagggcaacgtcgtcct
gatgagggagatgataggtatagcagaggcagcaatggtggctcgaaatttgacacagga
tcaagaactcagcagactgcaagaagtgcaacagtttctcataataccccaagtgggaca
ctaagttcacatggaggatcttctgtgaaaggaaatggatcagacactggaagtggtttg
tctgctgaggcttatagtctccgccatgaaatatcagttgttggtgataatgtgcctcca
ccattcacttcatttgaatctactggcttcccatctgaaattcttagagaggtacaaagt
gctggtttctctgccccaactccaattcaagcacaatcttggccggttgctcttcaaagt
agagatatagtagccattgctaaaactggttcggggaagaccttggggtatttgcttcca
ggatttatccatctcaagcgcacccgtaataaccctcagatgggtccaactgtattggtt
ttatcaccaactagggagctggcaacacagattcaagatgaggcagtgaagtttgggaag
tcatcaaggatatcttgtgtgtgtttgtatggaggagctccaaagggaccacagttgaga
gatattgaccgaggagcagatgttgtggttgccactcctggccgcttgaatgatattctt
gaaatgaagagaatcagtcttcatcaagtttcttatttagtgctggatgaggctgaccgg
atgctggacatggggtttgaaccacaaataaggaagattgtgaaggagatacctgctcgt
cgccagaccctaatgtataccgcaacttggccgaaggaggttcgaaagattgcagcagat
ctactggtcaaacctgttcaggttaacattggcaatgttgacgaactggttgcgaataag
tctatcacacagtacgttgaagtactgacctcaatggagaagcacagacgactggagcag
atattgcggtctcaagagccagggtctaagataattatcttttgttcgaccaagaagatg
tgtgatcaactttctcgcaatctaacccgccagtttggagctgctgcaattcatggcgac
aaatctcagagtgagagggattatgtgttgaatcaatttcgttctgggaggactccaatt
cttgtagcaactgacgttgcagctcgaggattggacatcaaggacataagggtggttatc
aactacgacttccctactggagtagaggattatgttcacaggattgggagaactggaaga
gcgggcgccactggcctggcttatacattttttggtgatcaggatgctaagtatgcatca
gatctcatcaaagttttggaaggtgcaaatcagcgagtacccccagaaattcgtgagctg
gcttcccgtggtggtgggatgaacaggttcagacgttggggttctgggcccagtggtggt
cgtgatgggggtcgtgggcaaaatgattcaagttacggtggaagggatggtggaagggga
ggaggatatggatttactccctcttctggcaggtatggtcaatctaatgggtatgacaga
ggccgcagtcccagccctgtcaaggcgtcgggatatagagcccgtagccgtagtcctgag
aggtttgacaaggctctgccaacaggtggtggctctgcaggtggatggagtttccacaaa
gcaatgatggaaagggagcggtcatcgcctccacgtagacgcaatgctgaggaagctgag
gagggaatgatacatccagagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (8)   
   RefSeq(nuc) (2)   
   GenBank (3)   
   EMBL (3)   
Protein domain (5)   
   Pfam (5)   
All databases (25)   

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