KEGG   Plutella xylostella (diamondback moth): 105382334
Entry
105382334         CDS       T03915                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
  KO
K12621  U6 snRNA-associated Sm-like protein LSm2
Organism
pxy  Plutella xylostella (diamondback moth)
Pathway
pxy03018  RNA degradation
pxy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pxy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105382334
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105382334
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pxy03019]
    105382334
   03041 Spliceosome [BR:pxy03041]
    105382334
Messenger RNA biogenesis [BR:pxy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     105382334
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     105382334
Spliceosome [BR:pxy03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    105382334
 Complex C
  U2 snRNP components
    105382334
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 105382334
NCBI-ProteinID: XP_011550495
Position
Un
AA seq 95 aa
MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLSEISVIDPDKYPHMLSVKNC
FIRGSVVRYVQLPADEVDTQLLQDAARKEATVSTR
NT seq 288 nt   +upstreamnt  +downstreamnt
atgctgttctattccttcttcaaatcacttgttggcaaagacgtggtcgtggagctgaag
aacgacctcagcatatgcggcacgctgcactccgtcgaccagtacttgaacataaagttg
tcggaaatcagtgttatagatcccgacaaatatcctcatatgttatcagtgaagaactgc
tttatccgtggttccgtggtgcgctacgtgcagctcccagccgacgaagtggacacgcaa
cttctccaggacgcagcgaggaaagaagccacagtatccacaagataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system