KEGG   Paracoccus yeei: A6J80_09070
Entry
A6J80_09070       CDS       T04781                                 
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
pye  Paracoccus yeei
Pathway
pye03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pye00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    A6J80_09070 (recQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pye03019]
    A6J80_09070 (recQ)
   03400 DNA repair and recombination proteins [BR:pye03400]
    A6J80_09070 (recQ)
Enzymes [BR:pye01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     A6J80_09070 (recQ)
Messenger RNA biogenesis [BR:pye03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     A6J80_09070 (recQ)
DNA repair and recombination proteins [BR:pye03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      A6J80_09070 (recQ)
SSDB
Motif
Pfam: RQC HRDC DEAD Helicase_C RecQ_Zn_bind
Other DBs
NCBI-ProteinID: ARC36510
UniProt: A0A1V0GRT5
Position
complement(1346301..1348325)
AA seq 674 aa
MSAAPLLRQVFGFDGFRPGQEEIVDAVAAGRDVLAIMPTGGGKSLCYQLPALMRDGLTVV
VSPLIALMRDQVRALTEAGVPAAALTSGNSEDENAEVLRALSARALRLLYIAPERLASGA
TVPMLRRAGVQAIAVDEAHCVSQWGHDFRPDYLRVGELRRALGVPLAAFTATADAETRDE
IVRRLFDGAAPQVFLRGFDRPNIHLAFQPKDGPRRQILDFAGARRGQSGIVYCGTRAKTE
TLAQALNEVGLAAAAYHGGMESDQRREVETRFQREDGLIVVATVAFGMGIDKPDIRWVAH
ADLPKSIEAYYQEIGRAGRDGAPAETLTLFGPDDIRLRRGQIDEGLAPPERKAADHARLN
ALLGLAESPSCRRVALLGYFGETSAPCGNCDICDDPPETFDGTQAAQKVLSAVLRTGESY
GAGHVIDVLLGNATDRIRARGHDRLPTFGVGRDLPRAEWQAIVRQMLGRDLIRPDPERHG
GLAITAAAHAVLRGETRVTLRRDLVKRAAPSVVVRTQVDDEDAPLLSALKAKRRALAEAA
RVPAYVIFPDRTLIEMAQSRPRTLDEMARVNGVGAKKLESYGMDFLQVIAGDVAPLHPAR
RALVGRASGALYDRLAEVQTRLARGEDGTGKPLSVSSSTLRRIAEARPRDLSRYLDPARL
ERFGPAFLAEIEAA
NT seq 2025 nt   +upstreamnt  +downstreamnt
atgtccgccgcgcccctgctgcggcaggtctttggcttcgacgggttccgccccggccag
gaagagatcgtggacgccgtggccgcaggccgcgacgtgctggcgatcatgccgacgggc
gggggcaagtcgctgtgctatcaactgcccgcgctgatgcgcgacgggctgacggtggtc
gtctcgccgctgatcgcgctgatgcgggaccaggtgcgggcgctgaccgaggcgggcgtg
cccgccgccgccctgaccagcggcaattccgaggacgagaacgccgaggtgctgcgcgcg
ctgtccgcgcgcgcgctgcggttgctgtatatcgcgcccgaacggctggcctcgggggcg
acggtgccgatgctgcggcgggcgggcgtgcaggccatcgcggtcgacgaggcgcattgc
gtcagccaatggggccatgatttccgccccgactacctgcgcgtgggcgaattgcgccgc
gcgctgggcgtgccgctggccgcctttaccgccaccgccgatgccgagacgcgggacgag
atcgtccgccgcctgttcgacggcgccgcgccgcaggtgttcctgcgcggcttcgaccgg
ccgaacatccacctggcctttcagcccaaggacggcccgcgccggcagatcctggatttc
gccggggcgcgtcgcggccagtcgggcatcgtctattgcggcacccgcgccaagaccgaa
accctggcccaggctttgaacgaggtcggcctggcggccgccgcctatcacggcggcatg
gaatccgaccagcgccgcgaggtcgagacccgcttccagcgcgaggacgggctgatcgtg
gtcgccaccgtcgccttcggcatgggcatcgacaagcccgacatccgctgggtggcccat
gccgacctgccgaagtcgatcgaggcctattatcaggaaatcggccgcgccggccgcgac
ggcgccccggccgagacgctgacgctgttcgggcccgacgacatccgcctgcgccgcggc
cagatcgacgaaggccttgcgccccccgaacgcaaggccgccgaccatgcgcggctgaac
gccctgctgggccttgccgaaagccccagttgccgccgcgtcgcgctgctcggctatttc
ggcgagacctcggccccctgcggcaactgcgacatctgcgacgatccgcccgagacgttc
gacggcacccaggccgcgcagaaggtgctgtcggccgtcctgcgcaccggcgagagctat
ggcgcgggccatgtcatcgacgtgctgctgggcaatgcgaccgaccgcatccgcgcccgc
ggccacgaccggctgccgacctttggcgtgggccgcgacctgccccgcgccgaatggcag
gccatcgtgcgccagatgctgggccgcgacctgatccgccccgatcccgaacgccacggc
gggctggccatcaccgccgccgcccatgccgtgctgcgcggcgagacccgcgtcaccctg
cgccgggacctggtcaagcgcgccgcgccctcggtcgtggtgcgcacccaggtcgatgac
gaggatgcgccgctgctgtccgcgctgaaggccaagcgccgcgccctggccgaggcggcc
cgggtgccggcctatgtcatctttcccgaccgcacgctgatcgagatggcgcaaagccgc
ccccgcaccctggacgagatggcgcgcgtgaacggggtcggcgcgaaaaagctggaaagc
tacgggatggacttcctgcaggtcatcgcgggggatgtcgcgccgcttcatcccgcgcgc
cgggcgctggtcgggcgcgcctcgggcgcgctctacgaccggctggccgaggtgcagacc
cgccttgcccggggcgaggacggcaccggcaagccgctttccgtcagcagctcgaccctg
cgccgcattgccgaggcaaggccgcgggacctgtcgcgctatctggatccggcgcgattg
gagcgcttcggcccggcgttcctggccgagatcgaggcggcatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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