KEGG   Plasmodium yoelii: PY17X_1330600
Entry
PY17X_1330600     CDS       T01035                                 
Name
(RefSeq) replication factor C subunit 3, putative
  KO
K10756  replication factor C subunit 3/5
Organism
pyo  Plasmodium yoelii
Pathway
pyo03030  DNA replication
pyo03410  Base excision repair
pyo03420  Nucleotide excision repair
pyo03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pyo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PY17X_1330600
   03410 Base excision repair
    PY17X_1330600
   03420 Nucleotide excision repair
    PY17X_1330600
   03430 Mismatch repair
    PY17X_1330600
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pyo03032]
    PY17X_1330600
   03036 Chromosome and associated proteins [BR:pyo03036]
    PY17X_1330600
   03400 DNA repair and recombination proteins [BR:pyo03400]
    PY17X_1330600
DNA replication proteins [BR:pyo03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    PY17X_1330600
  DNA Replication Termination Factors
   ELG1-RFC complex
    PY17X_1330600
Chromosome and associated proteins [BR:pyo03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    PY17X_1330600
DNA repair and recombination proteins [BR:pyo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     PY17X_1330600
  Check point factors
   HRAD17(Rad24)-RFC complex
    PY17X_1330600
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 AAA_22 AAA_11 ResIII AAA_16 AAA_14 AAA_assoc_2 AAA_19 DUF815 RuvB_N AAA_30 DEAD AAA_24 bpMoxR AAA_3 ATPase_2 AAA_7 AAA_5 Viral_helicase1 TIP49 DNA_pol3_delta nSTAND3 GPAT_N SLFN-g3_helicase ABC_tran Mg_chelatase
Other DBs
NCBI-GeneID: 3789846
NCBI-ProteinID: XP_724521
UniProt: A0A077Y8Z6
Position
13:join(1435261..1435305,1435752..1436741)
AA seq 344 aa
MIDVKPSKIDEQIPWVEKYRPGVLNDIISHEQVISTIRKFVEKGELPHLLLHGPPGTGKT
STILAVCKELYGESRSSFVLELNASDDRGITVVREQIKTFAESKNHYNICERTSLKLIIL
DEADHMTFPAQNAMRRIMENYAKNVRFCLICNYVNKITPAIQSRCTSFRFSPLKEEYMLN
KALDIAKSENVNLTKNGVESLIRVGRGDMRRILNCLQVVSLSHKNMVIDENVILSTLDIP
LPSEIKFILEHLTKSTIKESYEIITKLQEDKGYSIKDIMICLYETVLTYDYPDSAICLLL
KNFGEIEERCASGATEQITLSSLISAFIEFRNELFKLKYEPNKA
NT seq 1035 nt   +upstreamnt  +downstreamnt
atgattgatgttaaaccctccaaaattgatgagcaaattccatgggtggaaaaatatagg
cctggcgtgttaaatgatataatatcacatgaacaagttatatcaactatacggaagttt
gttgaaaaaggtgaactgccacacttgcttttacatggcccacccggtacaggaaaaaca
tctacaattttagcagtatgtaaagaactatatggagaatctagaagctcttttgtatta
gaattaaatgcatcagatgacagaggtataactgtggttcgagagcaaataaaaacattt
gctgaatcaaaaaatcattataatatttgtgaaaggacctctttaaaactgattatatta
gatgaagctgaccatatgacatttcctgcgcaaaatgctatgagaagaattatggaaaat
tatgctaaaaatgtccgtttttgcttaatatgtaattatgttaataagattacaccagct
atacaatcaagatgtacatcatttcgattttctccattaaaagaagaatatatgctaaat
aaagctttagatatagcaaaatcagaaaatgtaaatcttacaaaaaatggtgtagaaagt
cttatacgtgttgggcgtggagatatgagaagaattttaaattgtttacaagtagtatca
ctaagtcataaaaatatggttattgatgaaaatgtaatattatctacattagatattcca
ttacctagtgaaataaaattcatattagagcatcttacaaaaagtactataaaagaatca
tatgaaattatcacaaaattgcaagaagataaaggatattcaataaaagatattatgata
tgtttatatgaaactgttttaacttatgattatcctgattcggccatttgccttcttctt
aaaaattttggagaaatagaagaaagatgtgcttctggtgccactgaacaaataacctta
tcttctctaattagcgcatttattgaatttcgaaatgagttatttaaattgaaatatgaa
ccaaacaaagcataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (29)   
   Pfam (29)   
All databases (45)   

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