KEGG   Phenylobacterium zucineum: PHZ_c1739
Entry
PHZ_c1739         CDS       T00750                                 
Name
(GenBank) pyruvate dehydrogenase complex, E3 component, lipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
pzu  Phenylobacterium zucineum
Pathway
pzu00010  Glycolysis / Gluconeogenesis
pzu00020  Citrate cycle (TCA cycle)
pzu00260  Glycine, serine and threonine metabolism
pzu00280  Valine, leucine and isoleucine degradation
pzu00310  Lysine degradation
pzu00380  Tryptophan metabolism
pzu00620  Pyruvate metabolism
pzu00630  Glyoxylate and dicarboxylate metabolism
pzu00640  Propanoate metabolism
pzu00785  Lipoic acid metabolism
pzu01100  Metabolic pathways
pzu01110  Biosynthesis of secondary metabolites
pzu01120  Microbial metabolism in diverse environments
pzu01200  Carbon metabolism
pzu01210  2-Oxocarboxylic acid metabolism
pzu01240  Biosynthesis of cofactors
Module
pzu_M00009  Citrate cycle (TCA cycle, Krebs cycle)
pzu_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pzu_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
pzu_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:pzu00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    PHZ_c1739
   00020 Citrate cycle (TCA cycle)
    PHZ_c1739
   00620 Pyruvate metabolism
    PHZ_c1739
   00630 Glyoxylate and dicarboxylate metabolism
    PHZ_c1739
   00640 Propanoate metabolism
    PHZ_c1739
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    PHZ_c1739
   00280 Valine, leucine and isoleucine degradation
    PHZ_c1739
   00310 Lysine degradation
    PHZ_c1739
   00380 Tryptophan metabolism
    PHZ_c1739
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    PHZ_c1739
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pzu04147]
    PHZ_c1739
Enzymes [BR:pzu01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     PHZ_c1739
Exosome [BR:pzu04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   PHZ_c1739
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 NAD_binding_8 GIDA HI0933_like FAD_oxidored 2-Hacid_dh_C FAD_binding_3 DAO Lys_Orn_oxgnase AlaDh_PNT_C 3HCDH_N XdhC_C Thi4
Other DBs
NCBI-ProteinID: ACG78150
UniProt: B4RBV3
Position
complement(1948797..1950188)
AA seq 463 aa
MADAFDVVVIGSGPGGYVTAIRASQLGFKTAIVERAELGGICLNWGCIPTKALLKSGEVY
EQLDHLKDYGLSVEKRGFDFEAVVQRSRKVAAQMNSGVTFLMKKHKIEVVQGTARLEKGS
PAPTVVVGQRKLTAKHVILATGARARTVPAVGLEPDGERVWTYREALVPKAAPKSLVVVG
SGAIGMEFASFYRALGSEVTVIEMMPRILPVEDEEISKTARKAFEKRGIRFRVPANVKKL
TKGKGGVSLEIEADGKAETLQADVCIVAIGIVGNVEDLGLEALGVKIEKTHVVTDKHGAT
GVPGLYAIGDVAGPPWLAHKASHEGVHCIEHIAGLKPTNLTAPIPGCTYTTPQIASVGLT
EAQAKEQGLEPKVGRFPFRVNGKAVAAGEPDGLVKTIFDGKTGALIGAHMVGHEVTEMIQ
GFAMAMTLEATEAEIQATVFPHPTMSEAMHEAALDAYGRVLHI
NT seq 1392 nt   +upstreamnt  +downstreamnt
atggctgatgcgttcgacgtcgttgtgatcggctctggccccggcggctacgtcaccgcc
atccgcgcctcgcagctgggcttcaagaccgccatcgtggagcgggccgagctgggcggc
atctgcctgaactggggctgcatccccaccaaggcgctgctgaagtccggcgaggtctac
gaacagctcgaccacctgaaggactacggcctgtcggtggagaagcgcggcttcgatttc
gaggccgtggtccagcggtcccgcaaggtcgccgcccagatgaattcgggcgtcaccttc
ctgatgaagaagcacaagatcgaggtggtgcaggggacggcgcggctggagaagggctcg
cctgcgccgacggtcgtggtcggccagcgcaagctgaccgccaagcatgtgatcctggcc
accggcgcgcgggcgcgcaccgtccccgccgtcggcctggagccggacggcgagcgggtc
tggacctaccgcgaggccctggtccccaaggctgcccccaagtcgctggtggtcgtcggc
tccggcgccatcggcatggagttcgccagcttctacagggccttgggctcggaagttacg
gtgatcgagatgatgccgcgcatcctcccggtggaggacgaggagatctccaagaccgcc
cgcaaggccttcgagaagcggggcatcaggttccgcgtgccggccaacgtgaagaagctg
accaagggcaagggcggcgtcagcctggagatcgaggccgacggcaaggccgagaccctg
caggccgacgtctgcatcgtggccatcgggatcgtcggcaacgtcgaggacctcggcctt
gaggccctcggtgtgaagatcgagaagacccacgtggtcaccgacaagcacggggccacc
ggcgtgcccggcctctacgccatcggcgacgtggccggcccgccttggctggcccacaag
gcgagccacgagggcgtccactgcatcgagcacatcgccggcctgaagcccacgaacctg
accgcgccgattccgggctgcacctacaccacgccgcagatcgcctcggtgggcctgacc
gaggcccaggcgaaggaacaggggctggagcccaaggtcggccgcttcccgttccgggtg
aacggcaaggcggtggcggccggcgagcctgacggcctggtgaagaccatcttcgacggc
aagaccggcgcgctgatcggcgcccacatggtcggccatgaggtcaccgagatgatccag
ggcttcgccatggcgatgacgctggaggccaccgaggccgagatccaggcgacggtcttc
ccgcacccgaccatgagcgaggccatgcacgaggccgcgctcgacgcctacgggcgggtt
ctgcacatctga

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