KEGG   Rahnella aquatilis HX2: Q7S_22115Help
Entry
Q7S_22115         CDS       T01850                                 

Definition
(GenBank) formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase (EC:3.2.2.23)
  KO
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
raa  Rahnella aquatilis HX2
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:raa00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Q7S_22115
Enzymes [BR:raa01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Q7S_22115
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Q7S_22115
DNA repair and recombination proteins [BR:raa03400]
 Prokaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Q7S_22115
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
Position
complement(4862506..4863315)
Genome map
AA seq 269 aa AA seqDB search
MPELPEVETSRRGIEPYLKGHTILHAIVRNPRLRWPVSAEILALSDQPVLSVQRRAKYLL
VELRTGWIIIHLGMSGSLRVLPEETEAGKHDHVDLVMDTGHVLRYTDPRRFGAWLWSSDL
AASNVLAHLGPEPLSEDFNADYLFEKSRTKKSPIKPWLMDNKLVVGVGNIYASESLFVAG
ISPDRPAHSLKRDETELLVRTIKAVLLRSIEQGGTTLKDFLQSDGKPGYFAQELQVYGRT
GEPCRACGTPIESKKHAQRTTFFCPRCQR
NT seq 810 nt NT seq  +upstreamnt  +downstreamnt
atgccggaattacctgaggttgaaaccagccgcagagggattgaaccctatctgaaaggt
cacacgatactgcatgccattgtgcgtaatccgcgcctgcgctggcctgtctcggcggag
atcttagcgttaagcgatcagccggttctgagtgtgcagcgtcgggcaaaatatctgctg
gttgagctgcgaaccggatggattatcattcatctgggcatgtccggcagtttgcgggta
ttgccggaagaaactgaagcaggtaagcatgaccacgttgatctggtgatggataccggc
catgtgctgcgttataccgatccgcgacgttttggtgcttggttatggtcttctgatctg
gcggccagtaatgtcttagcccatctggggccggaaccgctgagcgaggatttcaacgca
gattatctgtttgagaaatcccgtacgaagaaatcgccaatcaaaccctggctgatggat
aacaaactggtggtcggcgtcgggaatatctatgccagcgaatccctgtttgttgccggt
atttcacctgacagacctgcacattcgctcaaacgtgatgagacggaattgctggtgaga
accatcaaagcggtattgctgcgctctattgaacagggcgggacgacgctgaaagacttt
ctacagtcagatgggaagccaggatattttgcacaggaactgcaggtatacggcagaacg
ggcgagccttgccgcgcatgtggtacgcccattgagagtaagaaacacgctcagcgcacc
acgtttttttgcccgcgctgtcagcgctaa

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