KEGG   Rhodoferax antarcticus: RA876_16365
Entry
RA876_16365       CDS       T04655                                 
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
  KO
K01925  UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
Organism
rac  Rhodoferax antarcticus
Pathway
rac00470  D-Amino acid metabolism
rac00550  Peptidoglycan biosynthesis
rac01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:rac00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    RA876_16365
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    RA876_16365
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:rac01011]
    RA876_16365
Enzymes [BR:rac01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.9  UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
     RA876_16365
Peptidoglycan biosynthesis and degradation proteins [BR:rac01011]
 Precursor biosynthesis
  Amino acid ligase
   RA876_16365
SSDB
Motif
Pfam: Mur_ligase_M MurD-like_N Mur_ligase_C 2-Hacid_dh_C AlaDh_PNT_C Pyr_redox CbiA
Other DBs
NCBI-ProteinID: APW48507
Position
complement(3368558..3370156)
AA seq 532 aa
MNTLHDQHVLILGLGASGLAMARWCTRFGARVTVADTRLAPPQLARLQSELPAARFIGGA
FDAAMVQGTDLRAVFKSPGLSPAEVAPVFEAAQAIGIWAAGELGLYSQALAALKLERGYT
PAVLAITGTNGKTTVTSLTAQLLARAGKSVAMAGNIGPTLLDTLAQHLDANSLPDVWVLE
LSSFQLDGETSFEPTAAAALNISQDHLDWHGSMAAYAQAKSNIFGKTALMVLNREDEEVM
RMLSADKPPLGAKTPSGGSAAHAMASAGATKSPVKIKGQKPQQRACILFGGDMPQRPGDF
GIETINGMTWLVRALDADETKRKRNEAAEELFFQRLMPADALRIRGRHNATNALAALALA
SSAGCALAPMLFGLREYTGEPHRVQPIGTVNAVEYFDDSKGTNVGATVAALLGLGADRKV
VAILGGEGKGQDFSPLADPVRRCVRTVVLIGRDAPLIRAALQDTGIPVLDATSMADAVRQ
ASGQAQPGDAVLMSPACASFDMFDNYEHRARVFVQAVTELALDAGVMLEGQA
NT seq 1599 nt   +upstreamnt  +downstreamnt
atgaacaccctgcatgaccaacacgtgctgatcctgggcctgggtgcgtccggcctggcg
atggcgcgttggtgcacgcgttttggcgcgcgggtcacggtggctgatacgcgtttggcc
ccaccgcagttggcccggttgcagtccgagcttcccgccgcgcgcttcattggtggcgcc
tttgacgctgcgatggtgcagggcaccgacctgcgcgcggtgttcaagagtcccggcttg
agtccggctgaggttgctcctgtttttgaagctgctcaggcaattggtatatgggctgca
ggcgaattaggcttatattcccaagctttggcagcgttaaagttagagcgtggttacacg
cctgccgtgctggccatcaccggcaccaacggtaaaacaacggtaacctcgctgaccgcg
caactgctggcgcgcgctggcaaaagtgtggcgatggccggcaatatcggcccgacactg
ctcgacaccctggcccaacatctggatgccaacagcctgccggacgtctgggtgctggag
ctttcgagcttccagttggatggcgaaaccagcttcgagccgactgccgccgcggcgctg
aacatcagccaggaccatctcgactggcatggctcaatggccgcctacgcccaagccaag
agcaacatctttggtaaaaccgctctgatggtgctcaaccgtgaagacgaagaagtcatg
cggatgttgagcgccgacaagccgcccttaggcgcgaagaccccctcggggggcagcgca
gcacatgcaatggcaagtgcgggggccacgaaatcacccgtgaagatcaagggccaaaag
ccccagcagcgcgcttgcattttgtttggtggcgatatgccgcagcgcccgggcgacttt
gggatcgagaccatcaacggcatgacctggctggtgcgcgccctggacgctgacgagacc
aaacgcaagcgcaacgaagccgctgaagaactgtttttccagcggttgatgcctgccgac
gcgctgcgcattcgtggccgccacaacgccaccaatgccttggcggccttggcgctggca
agtagcgcgggctgcgcgctagcgcccatgctctttggcctgcgcgagtacaccggcgag
ccgcaccgcgtgcagccgattggtacggtgaacgcggtggaatatttcgacgacagcaaa
ggcacgaatgtgggcgccacggtggccgcgctgctgggtctgggggctgaccgcaaggtg
gtggcaattctgggcggcgagggcaaggggcaagacttttcgccgctggctgacccggtg
cgccggtgcgtgcgcacggtggtgctgatcgggcgtgacgcacccttgatccgggctgcg
cttcaagacaccggcatccctgtgctggatgccacctcgatggctgacgctgtgcgccaa
gccagcggacaggctcagccaggcgacgcggtgctgatgtcacccgcttgcgccagtttt
gacatgttcgacaactacgaacaccgcgcccgcgtgtttgtgcaggcggtgaccgagctg
gccctggatgccggtgtgatgctggaggggcaggcatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (25)   

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