KEGG   Riemerella anatipestifer RA-CH-2: G148_1153
Entry
G148_1153         CDS       T02438                                 
Name
(GenBank) hypothetical protein
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
rae  Riemerella anatipestifer RA-CH-2
Pathway
rae03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rae00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    G148_1153
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rae03400]
    G148_1153
Enzymes [BR:rae01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     G148_1153
DNA repair and recombination proteins [BR:rae03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     G148_1153
SSDB
Motif
Pfam: PriA_3primeBD DEAD ResIII PriA_C PriA_CRR Helicase_C nSTAND3 AAA_19 AAA_7 zf-MYND SIR2 zinc_ribbon_15 zinc-ribbons_6
Other DBs
NCBI-ProteinID: AGC40457
Position
complement(1222435..1224882)
AA seq 815 aa
MLYAQVILPLNLKGTFTYKVPIDLQDKIALGMRVLVPFRGKKIYTGIISDLHQNTPEEFS
PKEIYSILDDTPILPLPQLEFWQWLSSYYLCNLGEIYRLAFPSSLKLESETYLKLKPNVN
IDYELLDANEILLIQALEVQQLVNLSEMEVFIPKKNLIKTINALIDMHYIEIDEKVAEKY
KVKEVAYVKIKEELLGNQSLAEVISSLNRAEKQKELFLLILSKQTTSPEVPIKKSILFEE
GNFAHAQMKALIDKGLVDEYYLQHDRLETYNGDIEDIEPLTETQNNTFKAIEQSFAQNQK
VLLHGVTSSGKTHIYIHLIEQLIKENKNTLLLLPEIALTKQIIRRLEKKYGDLIGFYHQK
LTDFERVEVWRKVKLNKIKVLIGTRNALFLPYQNLDLVIVDEEHDSAYKPREASPYFNAK
DAAQILAHHYKAHLLLGSATPSLESYYAAQKGKLKYLYLGERYGNVDLPDFEIINIKEEQ
ETKTINGNFSAALIQKIQENLEKNKQIIILHNRRGYANVVECEACGYVTYCSNCDVVMTY
HKSSNEMKCHYCGQRASKPNQCPRCQSQQLNTKGVGVEQVAEEVKRLFPEAEVDRMDIDS
MRKKFAYEKLYEKIENRETNIIVGTQMISKGLDFDHIDLVAIPKADALLYVQDFRAEEKA
YQLITQVSGRAGRTSGKGKIIIQTYNPTHPLFSLIKHNSTQEIYEHFLNDRKKFLYPPFT
KVVLLEIKHSKEGKADRASQFLGSILRKYLPLDCVLGPEKAPIAKLKNKYQFQILLKLPR
NNKYFTFKEYISQSLDEFREISAYQSVKIELFVDF
NT seq 2448 nt   +upstreamnt  +downstreamnt
atgctttacgctcaagtcatactgccacttaatctaaaaggaactttcacttacaaagtt
cccattgatttacaggataaaatagcgttgggtatgcgcgttcttgttccgtttagagga
aagaaaatctatactggaatcatctcagacctacaccaaaacactcccgaagagttttct
ccaaaggaaatttacagcattttagacgacactcctattttacctctcccacagcttgag
ttttggcaatggctatcttcttactatctgtgtaatttaggcgaaatttaccgtttagca
tttccttcatcattaaaattggagagtgagacttatctaaaactcaaaccaaatgttaac
atagattatgaacttctagatgccaacgaaatacttttaatacaggcattggaagttcag
caattagtcaatctttctgaaatggaagtctttattccgaagaaaaatttaattaaaacc
atcaacgctcttatagatatgcactatatagagatagatgaaaaagtggcagaaaagtac
aaagtaaaggaggtagcttatgtaaaaattaaagaggaattgctaggcaatcagtcttta
gcagaggtcatttctagccttaatagagcggaaaaacaaaaagaacttttcctgctcatt
ttgtctaaacaaacgacttcgcctgaagttcctattaaaaaatctattttgtttgaggaa
ggtaatttcgctcacgcccaaatgaaagctctgatagataaaggtctagtagatgaatat
tacctccagcacgaccgactagagacttacaatggtgatatagaagacattgaacctctt
actgaaactcaaaacaacacatttaaagcaatagaacagtcttttgctcaaaatcagaaa
gtattattacacggcgtaacttcttcggggaaaacccacatctatatccacttgatagag
caactcatcaaagagaataaaaacacattattattactaccagaaattgcattaaccaag
caaattatccgtaggctagaaaagaaatatggcgatttaattggcttttatcatcaaaaa
ctcaccgattttgaacgagtggaagtttggcgaaaagtaaaactcaacaagattaaagtc
cttattggaactagaaacgcattgtttctgccctaccaaaatttagatttagtaattgta
gatgaagaacacgattctgcctacaaacctagagaagctagcccttactttaatgctaaa
gatgcagctcaaatcctagctcatcattataaagcacatctactgctcggctctgccacg
ccatctttagaatcttattacgctgcacaaaaaggaaaacttaagtacctttatttaggc
gaacgatacggcaatgtagatttaccagattttgaaatcatcaatattaaagaagaacaa
gagactaaaactataaatgggaatttttcggcagcgttaattcaaaaaattcaggaaaat
ttagagaagaacaaacaaattattatcctccataacagaagaggctatgccaatgtagta
gaatgtgaggcttgtggatacgtaacctattgctctaactgtgatgtggtaatgacctat
cacaaatcttctaacgaaatgaagtgccattattgcggacaaagagcttctaaacccaac
caatgtcctaggtgccagtctcaacaactcaataccaaaggggttggtgtagaacaagtg
gcggaggaagtcaaaagattgtttccagaggcagaagtggacagaatggacatagactct
atgagaaaaaaattcgcctatgaaaaactctacgaaaaaatagaaaacagagaaaccaac
atcattgttggcacacagatgatttctaaaggtttagactttgaccatatagacctagtg
gcaattcccaaggctgatgcactcctatatgtacaagatttccgagcggaagaaaaagcc
taccagctcatcactcaagtatctgggagagcagggagaacttcaggaaaaggtaagatt
attatacaaacttacaacccaacacaccctttgtttagcttgattaagcacaatagcact
caagaaatctatgagcattttctaaatgatagaaaaaaattcctctatccaccatttacc
aaagtagtacttttagaaattaaacattccaaagaaggcaaggcagatagagcttcacaa
tttttaggttctatccttaggaaataccttcctttagactgtgttttaggtccagaaaag
gctcctatcgcaaagctgaaaaacaaatatcagttccaaatattactcaaactgcctaga
aataataaatacttcactttcaaagagtacatttcacaatcattggacgagttcagagaa
atctccgcttatcaatctgtgaaaatagagttatttgtagatttttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (13)   
   Pfam (13)   
All databases (22)   

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