KEGG T00979: RAF

Rickettsia africae: RAF_ORF0219

Entry

RAF_ORF0219 CDS T00979

Gene name

sucA

Definition

2-oxoglutarate dehydrogenase E1 component (EC:1.2.4.2)

Orthology

K00164

2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]

Organism

raf Rickettsia africae

Pathway

raf00020	Citrate cycle (TCA cycle)
raf00310	Lysine degradation
raf00380	Tryptophan metabolism
raf01100	Metabolic pathways
raf01110	Biosynthesis of secondary metabolites
raf01120	Microbial metabolism in diverse environments

Module

raf_M00009	Citrate cycle (TCA cycle, Krebs cycle)
raf_M00011	Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:raf00020]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:raf00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:raf00380]

SSDB

Motif

Pfam:

Transket_pyr E1_dh

Other DBs

NCBI-GI:

229586423

NCBI-GeneID:

7815224

UniProt:

C3PMM1

Position

complement(235921..238707)

AA seq 928 aa
MEEDFKTTDYLFGGNAVFVEALYKQYLANPASVDQTWQEFFAGIKDNNTLLNKSTAKIII
PDEIKKESLNNNLSSEDLNSLKAKEMINAYRKHAHYLANLDPLGLELRKTKNDLKLNIET
FGLDSGQLEENINITDEFVGTWNCKLSELVTKFDKVYTGSIGVEFEQIENVAGKNWLYNK
LESEVTFSSEDKKTILNDLVEVEGFEQYLHTKFPGAKRFSIEGGDASIVAMSKAIDLSMH
QGVSEIVIGMAHRGRLNTLTKVVGKPYKAVIAGFISGSVFPDELNVSGDVKYHLGYSSDR
TLEDKKIHLSLADNPSHLEAVNPIVAGKVRAKQDILGDTKRSKVKAILVHGDAAFCGQGV
VAESLSMSPLAAYDIGGILHFVINNQLGFTANAADTRASRYSTEFAKIIAAPILHVNGDD
IEAVLKATNIAVEYRQKFGKDIVVEIICYRKYGHNEGDEPMYTQGKMYNIIKNKLTPGNI
YANELVKSGVIDNNYFAKLKEEFKAKLDKEYEQAKSYKQEAHFLGGLWQGISRTRTQATI
TGISKKTLHDLGTKLCEIPKDFAVNPKLVKLFEARKATLTADQPIDWATAEQLAFASLLA
SGTNIRLTGQDSGRGTFSHRHSVLHNQIDGTTYIPLNNLSKEQAKYEVADSNLSEYAVLG
FEYGYSLANPKNLVLWEAQFGDFANGAQIIFDQFISSSETKWLRMSGLVVLLPHAFEGQG
PEHSSARLERFLQLAAENNMYVTYPTTPASIFHLLRRQILDDTRKPLIVMSPKSLLRHKY
AVSKLDELGENTTFLPVLDEVTKVDTNNITKVILCSGKVYYDLFEMRGNNSNIAIIRLEQ
LYPFEKKLVASLLKKYNRTQEFIWCQEEPKNMGTWCYIVAHLNDALKEAGIKNEFKYVGR
EESASPAVGSLQAHNKQQEKLLMTALGI

NT seq 2787 nt +upstreamnt +downstreamnt
atggaagaagactttaaaacaacagattatttatttggcgggaatgctgtttttgttgaa
gcgctatataagcaatatctagccaaccctgcctcggttgatcaaacttggcaagaattt
tttgccggcattaaggataataatactttactcaataaaagtacggcaaaaataattatc
cctgatgaaataaaaaaagaatcgttaaataataatttatcttctgaagacttaaatagt
ttaaaagctaaggaaatgatcaatgcttatcgcaagcatgctcactatttagcgaatctt
gatccgcttggtcttgagctacgtaaaacaaaaaatgatttaaagcttaatatagaaact
tttggtcttgatagcggtcagctagaagaaaatatcaatattacggatgaatttgtcggt
acttggaactgtaaattatctgaattagtaaccaagttcgataaagtttatacaggctct
ataggtgtagagtttgagcaaatagaaaatgtagcaggaaaaaactggttatataataag
ctagaaagcgaagttacgttttcttctgaagacaaaaaaactatcttaaatgatttagta
gaagtagaagggtttgagcagtatttacatacaaaatttcctggagctaagcgtttttcc
attgagggtggtgatgcttctatagttgctatgagtaaagctatagatttatccatgcat
cagggcgtctcagaaatcgttatcggtatggcacatcgagggagattaaacactctaact
aaagtagtaggtaagccatataaagccgttattgctggcttcataagcggcagcgtattt
cctgatgagctaaatgtttcaggcgatgtaaaataccatttaggctattcgtccgataga
actctagaggataagaaaatacacttgtcgctagccgataacccttcacatttagaagcg
gtaaatcctatagttgcaggaaaagtaagagcaaagcaagatattcttggagatactaaa
cgcagcaaagtcaaagctatcttagtgcatggcgatgctgctttttgcggtcagggcgtg
gttgccgagagtctatcaatgtcacctttagctgcttatgatatcggcgggatattgcat
ttcgtcattaataatcagttaggttttacggctaacgctgcagatactagagctagtaga
tattctacggagtttgctaaaatcatagctgccccgattttacacgttaacggtgacgat
atagaagcagtgttaaaagccaccaatattgcggtagaatacaggcagaaatttggtaag
gatattgtagtagaaattatttgttaccgtaaatatgggcataatgagggcgatgagccg
atgtatactcaaggcaagatgtataacattattaaaaacaaactgacccctggaaatatt
tacgcaaatgagttagtaaaaagcggtgtaatcgacaataattattttgctaagttaaaa
gaagaatttaaagcaaaactagataaggaatatgagcaggcaaaaagttataagcaagaa
gcacatttcttaggcggattatggcaaggtatttctcgtactcgtacacaagctacaata
acgggtatcagtaaaaaaacattacacgatttaggtactaaactatgcgaaataccgaaa
gattttgccgttaatccaaaacttgtaaaactatttgaagctcgaaaagccactctaaca
gctgatcaacctattgattgggcgacggcagagcagctagcttttgcaagcttacttgct
tcaggcacaaatataaggctaaccggacaagattcgggacgcggtactttctcgcatcgt
cattcagtattgcacaaccaaattgatggtactacctatatacctctaaataatttatct
aaagaacaagcaaaatacgaggtagccgatagtaatttatctgaatatgcggtgcttggt
tttgagtatggttattcactcgcaaacccaaaaaatttagttttatgggaagcacaattc
ggtgattttgctaatggagctcagattatttttgaccagtttatttcaagcagcgaaact
aaatggcttcgtatgagcgggcttgtggttttgttacctcatgcatttgagggacaagga
ccggagcatagttcggcaagacttgagaggttcttacaactggcggctgagaataatatg
tatgttacataccctactacccctgcttcgattttccatctgctacgtcgccaaatactt
gatgatacccgtaaaccgttaatcgtaatgtcgccgaaatcattattacgtcataaatat
gctgtatctaaacttgacgagctaggtgaaaatactactttcttaccagttttagacgaa
gtaactaaagtagatacaaacaatattactaaagtaattttatgcagcggtaaggtatat
tacgatctatttgaaatgcgtggcaataacagtaatatagcgattattaggcttgagcaa
ttatacccttttgaaaaaaaacttgtagcatcgctattaaaaaaatataataggacgcag
gaatttatttggtgtcaggaagaaccaaagaatatgggcacttggtgttatatagttgct
cacttaaacgatgctttaaaagaagcaggaattaaaaatgaattcaaatatgtaggtaga
gaggaatcagcctctccagcagtaggttcgctgcaagcacataataaacagcaagagaag
ctattaatgacagcattgggaatatga

All links

Pathway (8)   
   KEGG PATHWAY (6)   
   KEGG MODULE (2)   
Chemical substance (13)   
   KEGG COMPOUND (13)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (35)   

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