KEGG T01422: Rahaq

Rahnella sp. Y9602: Rahaq_0995

Entry

Rahaq_0995 CDS T01422

Definition

exodeoxyribonuclease V subunit alpha (EC:3.1.11.5)

Orthology

K03581

exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]

Organism

rah Rahnella sp. Y9602

Pathway

rah03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:rah03440]

SSDB

Motif

Pfam:

AAA_30 UvrD_C_2 AAA_19 AAA_11 Helicase_RecD Viral_helicase1 AAA_22 PhoH DUF2075 AAA_28 UvrD-helicase Mg_chelatase NTPase_1 AAA_18 AAA_25 T2SE AAA_5 AAA_17

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

1063935..1065989

AA seq 684 aa
MKINSREDIAQLLASWVECGWLRELDRALVTFLAKEAPDAHPLLLLATALTSYQLGRGHV
CLDLQATLDDSAFSLSLPPEGDHADGAVIRPAAVLDDLSLQEWLAALVHPTLVGHHEGNS
PLVLTGQRLYLRRYWQYEQNVRAAIEQRLARSALHTLPVESLRAPLTALFPADAKSDIAN
WQKLACALAAGSAFSIITGGPGTGKTTTVVRLLALLQTLALEENGQPLRIRLAAPTGKAA
ARLNESIAGAVSKLDLSAIGNGNAVRESINTDVVTLHRLLGSRPDTRHFRHHPGNPLMLD
VLVVDEASMVDLEMMAALLAALPEQARLILLGDKDQLASVEAGALLSELCQRANGGHYLP
HTRDWLQSVTGEQIPDSLVDPQGTAMDQAVVMLRHSYRFDAQSGIGQLAEAVNDGDVKAL
KQVWKHGYADLAQLTLSTDDDAELRDWVVKGGTKQFPAAARREGVEPPVGYQHYLNVMIQ
ARPADNEPPEAFNRWAARVLLAYSQFQLLCALRGGRWGVEELNQRIADILRKEGLLKASI
GWYPGRPVLVTRNDYSQRLMNGDIGITLEIPHRLADGTVVPTLRVAFLAGDGTQDIRWVM
PGRLQAVETVFAMTVHKSQGSEFTHTALLLPENLSPILTRELIYTGITRARHWFSLGCVG
GMNAVLPDAVKRRVLRASGLIESA

NT seq 2055 nt +upstreamnt +downstreamnt
atgaaaatcaacagccgtgaagatatcgcacaactgctggcgagctgggtggaatgtggc
tggctgcgcgaactcgatcgcgcactggtgacgtttctggcaaaagaagcgccggacgcg
catccgttattgttgctggcgaccgcactgaccagctatcagttagggcgcggtcatgtg
tgtctggatttgcaggccacgcttgatgacagcgcattctcactctcgctgccaccggaa
ggcgatcacgctgacggcgcggtgatccgtccggcggccgtgctcgacgacctgagtttg
caggaatggctggcggcgctggtgcacccgacgctggtcggacaccacgaaggtaattcg
ccgctggtgctgaccggccagcgcctgtatctgcgccgttactggcagtacgaacagaat
gtgcgggcggcaattgaacaacgtctggcgcgcagtgcgctgcacactttgccggtggaa
tctttgcgtgcgccgctgacggcgttattcccggcggatgcgaaatctgatatcgccaac
tggcagaaactggcctgcgcgctggcggcgggcagtgcgttcagcattattaccggcggg
ccgggcaccggtaaaaccaccacggtggtgcgtctgctggcgttgttacagacgctggcg
ctggaggaaaatggtcagccactgcgcatcagactggccgcgccgaccggcaaggcggca
gcaagactcaatgaatcaattgccggtgcggtatcgaagctggatctcagtgcgatcggc
aacggtaatgcggtgcgagaaagtatcaacaccgatgtggtgacactgcaccgtctgctc
ggcagccgccccgatacgcggcattttcgccatcatccgggcaacccgctgatgctggat
gtgctggtggttgatgaagcgtcaatggtcgatctggaaatgatggccgcattgctggcg
gcattgccggaacaggcgcgtctgatcctgctcggcgataaagatcaactggcgtcggtg
gaggcgggggcattactgagcgagttatgtcagcgcgccaacggcggccattatctgccg
catacccgcgactggttgcaaagcgtgaccggcgaacagatcccggattcgctggttgat
ccccagggtacggcgatggatcaggctgtagtgatgctgcgccacagttaccgttttgat
gcacaaagcggcattggtcagttagcggaagcagtaaatgacggggatgtgaaagcgctg
aaacaggtctggaaacatggatacgctgacctggcgcaactgacattgagcactgacgat
gatgctgaactgcgcgactgggtggtgaagggcggcacgaagcagttcccggcggcggcc
agacgcgaaggcgtagaacctccggtcggctatcaacattatctcaacgtgatgatccag
gcgcgaccggcagacaatgaaccgccggaagccttcaaccgctgggcggccagagtgctt
ctggcctacagccagttccagctgctgtgcgccttacgtggcgggcgctggggtgtggaa
gaactgaatcagcgcatcgccgacatcttgcgaaaggaagggttgcttaaggcgtcgatc
ggctggtatccggggcgtccggtgctggtgacccgcaatgattacagccagcgtctgatg
aacggcgatatcggcatcacgctggagatcccgcatcgtcttgccgatggtactgtggtg
ccgaccctgcgagtggcgtttctggccggagacggtacgcaggatatccgctgggtgatg
ccggggcgtttgcaggcggtggaaaccgtatttgccatgacggtgcacaaatcacaggga
tccgaatttacccataccgcgctgctgctgccggagaatctcagtccgatcctcacgcgc
gagctgatttacaccggcattacccgtgcgcgtcactggttcagtctgggatgtgtcggg
ggaatgaatgccgttttaccggatgcggtgaagcgtcgggtgttacgtgccagcggatta
atcgaaagcgcgtaa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-RAH (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (18)   
   Pfam (18)   
All databases (28)   

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