KEGG T01422: Rahaq

Rahnella sp. Y9602: Rahaq_3149

Entry

Rahaq_3149 CDS T01422

Definition

2-oxoglutarate dehydrogenase E1 (EC:1.2.4.2)

Orthology

K00164

2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]

Organism

rah Rahnella sp. Y9602

Pathway

rah00020	Citrate cycle (TCA cycle)
rah00310	Lysine degradation
rah00380	Tryptophan metabolism
rah01100	Metabolic pathways
rah01110	Biosynthesis of secondary metabolites
rah01120	Microbial metabolism in diverse environments

Module

rah_M00009	Citrate cycle (TCA cycle, Krebs cycle)
rah_M00011	Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:rah00020]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:rah00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:rah00380]

SSDB

Motif

Pfam:

Transket_pyr E1_dh FAM110_N

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(3399696..3402503)

AA seq 935 aa
MQNGAMKAWLDSSYLAGANQSYIEQLYEDYLTDPGSVDDSWRSIFKQLPTVGVKPEQLHS
QTRDYFRRLAKDASRYNSSISDPETDAKQVKVLQLINAFRFRGHQNANLDPLGLWKLDAV
PDLDPAFHHLTEADFQETFNVGSFAIGKETMQLGELYKALKQTYCGSIGAEYMHITNTEE
KRWIQQRIESVAGRASFTNDEKKTFLKELTAAEGLERYLGAKFPGAKRFSLEGGDALVPM
LKEMIRHAGKNGTREVVLGMAHRGRLNVLINVLGKKPQDLFDEFSGKHKEHLGTGDVKYH
MGYSSDVETEGGMVHLALAFNPSHLEIVSPVVIGSVRARRDRLDEARSNMVLPITIHGDA
AITGQGVVQETLNMSLARGYEVGGTVRIVINNQVGFTTSNPKDARSTDYCTDIAKMVQAP
IFHVNADDPEAVAFVTRLALDFRNTFKRDVMIDLVCYRRHGHNEADEPSATQPLMYNKIK
KHPTPRKIYADVLTEQNVASLEDATEMVNLYRDALDAGECVVEEWRQNDMHTFTWSPYLN
HEWDEAYPNKVELKRLQELARRVSHVPDAIEMQSRVAKIYGDRNEMAEGNKKFDWGGAEN
LAYATLVDEGIPIRLSGEDTGRGTFFHRHAVIHNQKNGSVYVPLANIHNSQGEFNVWDSV
LSEEAVLAFEYGYATAEPRTLTIWEAQFGDFANGAQVVIDQFISSGEQKWGRMCGLVMLL
PHGYEGQGPEHSSARLERYLQLCAEQNMQVCIPSTPAQVYHMIRRQALRGMRRPLIVMSP
KSLLRHPLAVSTLEELADGSFLPAIGEVDELDPKQVKRVVMCSGKVYYDLLEQRRKNEQT
DVAIVRIEQLYPFPHKAIQEVLEKFSHVHDFVWCQEEPLNQGAWYCSQHNFREVIPFGAS
LRYAGRPASASPAVGYMSVHQKQQQDLVNDALNVK

NT seq 2808 nt +upstreamnt +downstreamnt
atgcagaacggcgcaatgaaggcctggctggattcctcctatctggcgggtgcaaaccag
tcttacatagagcaactctatgaagactacttaaccgatcctggttccgttgacgatagc
tggcgttcgatttttaaacagctaccaacagtgggtgtgaaaccagagcaactccattct
caaactcgggactacttccgccgcctggcgaaagacgcgtcacgttataactcctccatc
agcgatccggaaacggatgccaagcaagtcaaggtgctgcagttaatcaacgccttccgc
ttccgtggtcatcagaatgcaaaccttgatcccctcggcctgtggaagctggacgccgtg
cctgatctggacccggcgttccaccatctgactgaagctgatttccaggaaaccttcaac
gtcggttcatttgccattggcaaggaaaccatgcagctcggcgagctgtataaagccctg
aagcaaacctattgcggttccattggtgcggaatacatgcacattaccaacactgaagag
aaacgctggatccaacagcgaatcgaatccgtggcaggtcgtgcgagtttcaccaatgat
gagaagaaaacgtttcttaaagagctgaccgcagcagaaggtctggagcgttatctgggg
gcgaaattcccgggtgcaaaacgcttctcactcgaaggtggcgatgcgctggttccgatg
ctgaaagaaatgatccgtcatgccggcaaaaacggaacccgtgaagtcgtgctgggtatg
gcgcaccgcggtcgtctgaacgtactgatcaacgtgctgggcaaaaaacctcaggacctg
ttcgacgaattctccggtaagcataaagaacacctgggcaccggtgatgtgaaataccac
atgggttattcgtctgatgtggaaaccgaaggcggtatggttcacctggcgctggcgttt
aacccgtcgcacctggaaatcgtcagcccggtggtcatcggttctgttcgtgcccgtcgt
gatcgtctggacgaagcgcgcagcaacatggttctgccaatcaccattcacggtgacgcg
gccattaccggtcagggtgtggttcaggaaaccctgaacatgtcgctggcacgcggttat
gaagtgggcggtaccgtgcgtatcgtcatcaataaccaggtgggcttcaccacctcgaat
ccgaaagatgcgcgttctaccgattactgtaccgatatcgcgaaaatggtgcaggcaccg
attttccacgtcaatgccgatgaccctgaagcggtggctttcgtgacccgcctggcattg
gatttccgtaacacctttaaacgtgacgtcatgatcgacctggtttgctaccgtcgccac
ggccataacgaggccgacgaacctagcgcaacccagccgctgatgtacaacaagatcaag
aaacacccgacgccacgcaagatttacgctgatgtcctgactgagcaaaacgtagccagc
ctcgaagatgccacggaaatggtcaacctgtaccgcgatgcgctggatgccggtgaatgc
gtggtggaagagtggcgtcagaatgacatgcacactttcacctggtcaccgtatctgaat
catgagtgggatgaggcttatccgaacaaggtcgagctgaaacgcctgcaggaactggcg
cgccgtgtcagccatgtgcctgatgcgatcgaaatgcaatcccgcgttgccaagatttac
ggcgaccgtaacgagatggccgaaggcaataagaagttcgactggggtggcgcggaaaat
ctggcctacgcgacgctggtagatgaaggtattccgattcgtctgtccggtgaagatacc
ggccgcggcaccttcttccatcgtcatgcggtgatccataaccagaaaaacggttccgtg
tacgtgccgctggccaatattcataacagccagggcgaattcaatgtctgggattccgtg
ctttccgaagaagcggtgctggcctttgaatacggttacgcgaccgctgaaccgcgcacc
ctgaccatctgggaagcgcagttcggtgacttcgccaacggtgcacaggtggttatcgac
cagttcatcagttccggcgaacagaaatggggccgcatgtgtggtctggtgatgctgctg
ccgcacggctacgaagggcaggggccggagcactcctccgcgcgtctggaacgttatctg
caactttgcgctgagcaaaatatgcaggtgtgtatcccgtctaccccggcgcaggtttac
cacatgatccgccgtcaggcactgcgcggtatgcgccgtccgctgatcgtgatgtcaccg
aagtctctgttgcgtcatcctctggcggtttctacgcttgaggagttggctgacggcagc
ttcctgccagcgattggtgaagtcgacgaactggatccgaaacaggttaagcgcgtggtg
atgtgctccggtaaggtttattacgacctgctggaacaacgtcgcaaaaacgagcaaacc
gatgtggcgattgtccgcatcgaacagctttacccgttcccgcacaaggcaattcaggaa
gtgcttgagaaattctcacacgttcatgatttcgtctggtgccaggaagagccactgaac
cagggcgcgtggtattgcagccagcacaatttccgtgaagtgattcctttcggggcttct
ttacgttacgcaggacgcccggcctctgcctctccggcagtgggctacatgtccgttcac
cagaagcaacagcaagatctggttaacgatgcgctgaacgttaaataa

All links

Pathway (8)   
   KEGG PATHWAY (6)   
   KEGG MODULE (2)   
Chemical substance (13)   
   KEGG COMPOUND (13)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-RAH (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (37)   

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