KEGG   Rahnella sp. Y9602: Rahaq_4353Help
Entry
Rahaq_4353        CDS       T01422                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
rah  Rahnella sp. Y9602
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:rah00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Rahaq_4353
Enzymes [BR:rah01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Rahaq_4353
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Rahaq_4353
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(4764525..4765334)
Genome map
AA seq 269 aa AA seqDB search
MPELPEVETSRRGIEPYLKGHTILHAIVRNPRLRWPVSAEILALSDQPVLSVQRRAKYLL
VELRTGWIIIHLGMSGSLRVLPEETEAGKHDHVDLVMDTGHVLRYTDPRRFGAWLWSSDL
AASNVLAHLGPEPLSEDFNADYLFEKSRTKKSPIKPWLMDNKLVVGVGNIYASESLFVAG
ISPDRPAHSLKRDETELLVRTIKAVLLRSIEQGGTTLKDFLQSDGKPGYFAQELQVYGRT
GEPCRACGTPIESKKHAQRTTFFCPRCQR
NT seq 810 nt NT seq  +upstreamnt  +downstreamnt
atgccggaattacctgaggttgaaaccagccgcagagggattgaaccctatctgaaaggt
cacacgatactgcatgccattgtgcgtaatccgcgcctgcgctggcctgtctcggcggag
atcttagcgttaagcgatcagccggttctgagtgtgcagcgtcgggcaaaatatctgctg
gttgagctgcgaaccggatggattatcattcatctgggcatgtccggcagtttgcgggta
ttgccggaagaaactgaagcaggtaagcatgaccacgttgatctggtgatggataccggc
catgtgctgcgttataccgatccgcgacgttttggtgcttggttatggtcttctgatctg
gcggccagtaatgtcttagcccatctggggccggaaccgctgagcgaggatttcaacgca
gattatctgtttgagaaatcccgtacgaagaaatcgccaatcaaaccctggctgatggat
aacaaactggtggtcggcgtcgggaatatctatgccagcgaatccctgtttgttgccggt
atttcacctgacagacctgcacattcgctcaaacgtgatgagacggaattgctggtgaga
accatcaaagcggtattgctgcgctctattgaacagggcgggacgacgctgaaagacttt
ctacagtcagatgggaagccaggatattttgcacaggaactgcaggtatacggcagaacg
ggcgagccttgccgcgcatgtggtacgcccattgagagtaagaaacacgctcagcgcacc
acgtttttttgcccgcgctgtcagcgctaa

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