KEGG T02107: RA0C

Riemerella anatipestifer ATCC 11845 = DSM 15868: RA0C_0630

Entry

RA0C_0630 CDS T02107

Definition

2-oxoglutarate dehydrogenase, e1 subunit

Orthology

K00164

2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]

Organism

rai Riemerella anatipestifer ATCC 11845 = DSM 15868

Pathway

rai00020	Citrate cycle (TCA cycle)
rai00310	Lysine degradation
rai00380	Tryptophan metabolism
rai01100	Metabolic pathways
rai01110	Biosynthesis of secondary metabolites
rai01120	Microbial metabolism in diverse environments

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:rai00020]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:rai00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:rai00380]

SSDB

Motif

Pfam:

Transket_pyr E1_dh

Other DBs

NCBI-GI:

383485231

NCBI-GeneID:

11997052

UniProt:

H8ME51

Position

complement(607767..610475)

AA seq 902 aa
MYQQYLKYPDSLEPSWKAFFQGFDFALENFGEDDSFTEKVGASSLSQQVGVPDDIIKEFK
VLNLIEAYRTRGHLFTRTNPVRERRTYLPDLSIENFGLSKSDLDTKFNSATETGMLGAAT
LADIIRHLDQIYCDSIGIEYMHIREVEEKEFIRQWISKNENHPELSADEKIQILSKLNQA
VAFENYLHTKFVGQKRFSLEGGESLIPALDQLISRSSKHGVDEVVLGMAHRGRLNVLTNI
FGKSYKQIFSEFEGKEFEEDVFSGDVKYHLGSTTKIKTAAGEEVIINLTPNPSHLETVAS
LVQGISRAKIDHTYGNNFKKVLPIVIHGDAAIAGQGIVYEIAQMMTLDGYKTGGTVHIVV
NNQVGFTTNYLDARSSTYCTDIAKVTDSPVMHVNADDVEAVVHAIRFAADYRAAFGKDVY
IDLLGYRKYGHNEGDEPRFTQPKLYNTIAKHPNPREIYKVKLEKEGVLSEGVLKKMEEEF
KTLLDKDFDASKEIQKNTLDVFMEQVWIKYLDPANKQKVLKAVETQYNAEQLKELAVKMS
SLPKDKAFIRKITRLFEQRLKMIEEDKLDWAMAELLAYATLLAEGYNVRISGEDVERGTF
SHRHAVVKTEDAEEEYVPLQHINESQQFHIYNSLLSEYAVLGFDYGYAMASPDTLTIWEA
QFGDFVNGAQIIVDQYLVAAEEKWKLQNGLVMLLPHGSEGQGAEHSSARLERFLTLCANN
NIFVANCTVPANYFHLLRRQMKFPFRKPLVVMTPKSLLRHPKVISSMEELANGSFQPVID
DATADASKVERLVMCSGKVYYDLLAKKEELGDEKVALVRLEQLYPLDSEKIETVLSKYSN
RKDFVWVQEEPENMGAWSYILRNFRKYDVQVIAPVPSGTPAPGSHKKYEINQTNVINQTF
GI

NT seq 2709 nt +upstreamnt +downstreamnt
atgtaccagcagtacttaaaatacccagatagtttagagccatcttggaaagcttttttt
caagggtttgattttgctctagaaaattttggtgaagacgattcttttacagaaaaagta
ggtgcgtcttctttatctcagcaagtaggtgtcccagatgatattataaaggagtttaaa
gttcttaacttaatagaggcttatagaactagaggtcatttgtttactagaactaaccct
gttagagagagaagaacttatctccctgatttatctatagagaattttggattatcaaag
tcagatttagatactaaatttaactctgctacagaaacaggaatgctgggagctgctact
ttggcagacattattcgtcatttagaccaaatttattgcgactctatcggtatagaatat
atgcatattcgtgaggtggaggagaaggaatttattcgccagtggatttctaagaatgaa
aatcacccagaactttcggcagacgaaaaaatacagattttatctaagctcaatcaagcg
gtagcatttgaaaactatcttcatactaaattcgtaggacaaaagagattttcactggaa
ggaggagagtctttaatccctgctttagaccagcttattagtcgttcttcaaaacatggt
gtagatgaagtggttttgggtatggcacacagagggaggcttaatgtattaactaatatc
tttgggaaatcatacaagcaaatcttctctgaatttgaaggtaaagaatttgaggaagat
gtattttctggagatgttaagtatcacttaggttctactacgaaaataaaaacggctgca
ggagaagaggtaattatcaatttaacgcctaacccgtctcacttagaaactgtagcttct
ttagtacaaggtatttctagagctaaaatagaccatacttacggtaataattttaaaaaa
gtattaccgattgttatccatggagatgcagctattgcaggacaaggaattgtctacgag
attgcacaaatgatgactttagacggctacaagacaggaggaacggttcatattgtagtt
aataatcaggtaggatttacaaccaactatctagatgcgaggtcttctacttattgtacg
gatattgctaaggtaacagactcgcctgtgatgcatgtaaatgcagatgatgtagaggct
gtggtacatgcaattagatttgcggcagattatagagcagcgtttggcaaagatgtttat
atagatttgttaggatacagaaagtacggacataacgaaggtgatgagcctcgttttacg
cagcctaaactttataataccattgcgaaacaccctaatcctagagaaatatataaagta
aaactagagaaagaaggagtgctttctgaaggagtgttgaagaagatggaggaagaattt
aaaacccttcttgataaagattttgatgcatctaaagaaattcaaaaaaatactttagat
gtatttatggaacaggtttggattaagtatctagaccctgcaaataaacaaaaagttcta
aaggctgtagaaactcaatacaatgctgaacagttaaaagagttggcagttaagatgtct
tctttacctaaagacaaggcgttcataagaaaaatcactagactttttgaacaaaggcta
aaaatgatagaagaggataagttagattgggcaatggcagaacttttagcttatgctacg
cttcttgcagaagggtacaatgtgagaatttctggggaagatgtggagagaggtactttc
tctcaccgtcatgcagtggtaaaaacagaagatgcagaggaggaatatgtaccattacaa
catatcaacgaaagtcagcagtttcatatttataactcattactatcagagtacgctgtt
ttagggtttgattatggttatgctatggcatcgcctgatactttaaccatttgggaagca
cagtttggagatttcgtgaatggcgctcaaattattgtggaccaatatttggtagctgca
gaagaaaaatggaagctgcaaaatggtttggtaatgttgttacctcacggctctgaaggg
caaggtgcagaacactcttcggctaggttagagagatttttaacgctttgtgctaataat
aatattttcgtagctaactgtacagttccagccaattatttccatttattgagaaggcaa
atgaagtttccgtttagaaaaccgttagtggtaatgacacctaagtcgttactaagacac
cctaaggttatttcttctatggaagagttagcaaacggaagtttccaaccagtgattgat
gatgctacggctgatgcttctaaggtggagagattagtgatgtgttctggtaaggtttac
tacgatttattggctaaaaaagaggaattgggagatgagaaagtagctttagtaaggctg
gagcagttatatcctttggattcagagaaaatagagactgtgttgtctaaatattctaac
agaaaagattttgtatgggttcaagaagagccagagaatatgggagcttggtcttatatt
ttgagaaatttccgcaagtatgatgtacaagtaattgcaccagttcctagtggaacgcca
gcaccaggtagccataagaagtatgagattaaccaaactaatgtaattaaccaaacattt
ggtatctag

All links

Pathway (6)   
   KEGG PATHWAY (6)   
Chemical substance (13)   
   KEGG COMPOUND (13)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (33)   

Download RDF

DBGET integrated database retrieval system