KEGG T01770: Rahaq2

Rahnella aquatilis CIP 78.65 = ATCC 33071: Rahaq2_1063

Entry

Rahaq2_1063 CDS T01770

Definition

exodeoxyribonuclease V subunit alpha

Orthology

K03581

exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]

Organism

raq Rahnella aquatilis CIP 78.65 = ATCC 33071

Pathway

raq03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:raq03440]

SSDB

Motif

Pfam:

AAA_30 UvrD_C_2 AAA_19 AAA_11 Helicase_RecD Viral_helicase1 AAA_22 PhoH UvrD-helicase DUF2075 AAA_28 Mg_chelatase NTPase_1 AAA_25 AAA_18 T2SE AAA_5

Other DBs

NCBI-GI:

383188967

NCBI-GeneID:

11790683

UniProt:

H2IZ42

Position

1102155..1104209

AA seq 684 aa
MKINSREDIVHLLTSWVECGWLRELDRALVTFLAKEAPDAHPLLLLATALTSYQLGRGHV
CLDLQATLDDSAFSLSLPPEGDHADGAVIRPAAVLDSLSLQEWLAALAHPTLVGHGEGNS
PLVLTGQRLYLRRYWQYEQNVRAAIEQRLARSALHTLPAKALRAPLTALFPADGQSAITN
WQKLACALAAGSAFSIITGGPGTGKTTTVVRLLALLQTLALEENGQPLRIRLAAPTGKAA
ARLNESIAGAVSKLDLSALGNGDAVRESINTDVVTLHRLLGSRPDTRHFRHHPGNPLMVD
VLVVDEASMVDLEMMAALLAALPEQARLILLGDKDQLASVEAGALLSELCQRANGGHYLP
QTRDWLQSVTGEQIPDALVDPQGTAMDQAVVMLRHSYRFDAQSGIGQLAEAVNDGDVKAL
KQVWKHGYADLAQLTLSADDDTVLRDWVVKGGVKQFPATAKPEGAEPPAGYQHYLNVMIR
ERPADDEPPEAFSRWATKVLLAYSQFQLLCALRGGRWGVEALNQRIADILRKEGLLKASI
GWYPGRPVLVTRNDYSQRLMNGDIGITLEIPHRLADGSVVPTLRVAFLAGDGTQDIRWVM
PGRLQAVETVFAMTVHKSQGSEFTHTALLLPENLSPILTRELIYTGITRARHWFSLGCVG
GINAVLPDAVKRRVLRASGLIENA

NT seq 2055 nt +upstreamnt +downstreamnt
atgaagatcaacagccgtgaagatattgtgcatctgctgacgagctgggtggaatgtggc
tggctgcgcgaactggatcgcgcactggtaacgtttctggcgaaagaagcgccggatgcc
catccgttgctattactggccaccgcactgaccagctatcagctcgggcgcgggcatgtg
tgcctggatttgcaggctacactcgacgacagcgccttttcactttcgctgccgccggag
ggagatcatgctgacggcgcggtgatccgtccggcagcggtgctggactctctgagtctg
caggaatggctggcggcgctggcgcacccgacgctggtcgggcacggcgaagggaattcg
cccctggtgctgaccggccagcgcctgtatctgcgccgttactggcagtatgaacagaat
gtacgggcggcaattgaacagcgtctggcacgcagtgcgttgcacactttgccggcgaag
gccctgcgcgcgccgctcactgcgctgttcccggcagatgggcaatctgctatcactaac
tggcaaaaactggcctgcgcgctggcggcaggcagtgcgttcagcattattaccggcggg
ccgggcaccggtaaaaccaccacggttgtgcgtctgctggcgttgttacagacgctggcg
ctggaagaaaacggccagccgctgcgtatccggctggctgccccgacgggtaaggcggcg
gcgcgtctgaatgagtcgatagccggtgcggtatcgaagctggatctcagtgcgctcggc
aacggtgatgcggtgcgtgaaagtatcaacaccgatgtggtgacgctgcaccgtctgctc
ggcagccgccccgatacccgccatttcaggcatcatccgggcaatccgctgatggtggat
gtgctggtggtcgatgaagcatcaatggtcgatctggaaatgatggcagcattgctggcg
gcattgccggaacaggcgcgtctgatcctgctgggtgataaagatcagcttgcgtcggta
gaagcgggtgcattactgagcgagttatgccagcgcgccaacggtggccattatctgccg
caaacccgcgactggctgcaaagcgtgaccggcgaacagatccctgatgcgctggttgat
ccgcaaggtacggcgatggatcaggccgtcgtcatgctgcgccacagttaccgttttgat
gcacaaagcggaatcggccagttggccgaagccgtaaatgacggtgatgtgaaagcgctg
aaacaggtctggaaacacgggtacgctgatctggcgcaactgacactgagtgcggatgat
gacaccgtactgcgcgactgggtggtgaagggcggagtgaagcagttcccggcgacggca
aaacctgagggtgcagaaccaccggccggctatcaacattatctcaatgtgatgatcagg
gagcgaccggcagacgatgaaccgccggaagcgttcagtcgctgggcaaccaaagtgctt
ctggcctatagccagttccagttgctgtgcgccttacgcggcgggcgctggggcgtggaa
gcgctgaatcagcgcatcgctgacattttgcgaaaagaaggattgcttaaggcgtcgatc
ggctggtatccggggcgtccggtgctggtgacccgcaatgattacagccagcgcctgatg
aacggcgatatcggcatcacgctggagatcccgcatcgtctggccgacggttctgtcgtg
ccgacccttcgggtggcatttctggccggagacggcacacaggatatccgctgggtgatg
ccgggacgcttgcaggcagtggaaacggtatttgccatgacggtgcataaatcgcaggga
tcagaatttacccataccgcgctgctgctgccggagaatctcagcccgatcctgacgcgc
gagctgatttacaccggtattacccgtgcgcgtcactggttcagtctgggatgtgtcggg
ggaataaatgccgttttaccggatgcggtgaagcgtcgggtgttacgtgccagcggatta
atcgaaaacgcgtaa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (17)   
   Pfam (17)   
All databases (26)   

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