KEGG T01770: Rahaq2

Rahnella aquatilis CIP 78.65 = ATCC 33071: Rahaq2_2562

Entry

Rahaq2_2562       CDS       T01770

Name

(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumB

K03212

23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189]

Organism

raq Rahnella aquatilis CIP 78.65 = ATCC 33071

Brite

KEGG Orthology (KO) [BR:raq00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:raq03009]
    Rahaq2_2562
Enzymes [BR:raq01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.189  23S rRNA (uracil747-C5)-methyltransferase
     Rahaq2_2562
Ribosome biogenesis [BR:raq03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Rahaq2_2562

SSDB

Motif

Pfam:

tRNA_U5-meth_tr Methyltransf_31 MTS Methyltransf_25 Cons_hypoth95 Methyltransf_12 Methyltransf_15 Methyltransf_11 Methyltransf_4 Methyltransf_32

Other DBs

NCBI-ProteinID:

AEX52414

UniProt:

H2IQ29

Position

complement(2743219..2744349)

AA seq 376 aa
MHCALYTAGTCRSCQWLDKPYLQQLADKQQDLRDLLSDLPVDEWGEPVTGAESAFRNKAK
MVVSGSVERPLLGMLHRDGTPVDLCDCPLYPASFPAVFPLLKTFIARAGLTPYNVARKRG
ELKFLLLTESRKDGGMMLRFVLRSDAKLAQLRAALPWLQQQLPQLKVISANLQPVHMAIL
EGDTEIPLTDVQRLEEDFNHVPLFIRPQSFFQTNPGVAEKLYATARDWVRARGDIRSMWD
LFCGVGGFGLHCATPQMKLTGIEISAEAISCAKESAARLGLQNVEFQALDSTGFATGKGE
VPDLVLVNPPRRGIGKALCEYLSRMAPDTILYSSCNAQTMAQDLALLPDYHILRVQLFDM
FPHTAHYEVMALLVRR

NT seq 1131 nt +upstreamnt +downstreamnt
atgcattgcgcactttataccgccggaacctgccgctcctgccagtggcttgacaaacct
tatttacaacagttagccgacaagcagcaggatctcagggatttgctgtcagatttaccg
gtggacgaatggggtgaaccggtgacgggtgcggaaagtgcatttcgtaataaagccaaa
atggtggtcagcggcagcgtggaacgtcctttactcggcatgttgcaccgcgacggtacg
ccggtcgatttgtgtgactgcccgctgtatccggccagttttcccgccgtctttcccctg
ctcaaaacctttattgcccgcgccggactgacgccttacaacgtcgcgcgcaaacgcggc
gagctgaaattcctgttactgactgaaagccggaaagacggtggcatgatgctgcgcttt
gtgttgcgctcagacgccaaactggcgcaactgcgcgcggcgctgccgtggctgcaacag
cagttgccgcagctgaaagtgatttccgccaacctccagccggtgcatatggcgatcctc
gaaggggataccgaaattccgctgaccgacgtccagcggctggaagaagattttaaccat
gtgccgctgtttatccgcccgcagagctttttccagactaaccctggggtggccgaaaag
ctttatgccacggcgcgtgactgggtgagggcgcgtggtgatatccgaagcatgtgggat
ttattctgtggcgtgggcggctttggtctgcactgcgcaacaccgcagatgaaactgacc
ggtatcgaaatcagtgcggaagcgatttcctgtgcgaaagaatcggcggcgcgtctgggc
ctgcaaaacgttgagtttcaggcgctcgattccaccggttttgcgaccggcaaaggcgag
gtgccggatctggtgctggtgaatccgccacgtcgcggcatcggcaaagcgttatgtgag
tatctcagccgcatggcgccggatacgattctctattcaagctgtaacgcccaaactatg
gcgcaggatctggcattactgccggactatcacattcttcgtgtccagcttttcgacatg
ttcccgcataccgcgcattacgaagtgatggcgctgctggtgcggcgttaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (19)   

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